RNA–Protein interactions for RNA: ENST00000521806.5

GPAT4-210, Transcript of glycerol-3-phosphate acyltransferase 4, human

TSL 5

Gene GPAT4, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPAT4-210	ENST00000521806	PCDHA11	Q9Y5I1	949 aa		12.44	□□□□□ -0.42
GPAT4-210	ENST00000521806	PRUNE2	Q8WUY3	3088 aa		12.44	□□□□□ -0.42
GPAT4-210	ENST00000521806	CYP2C9	P11712	490 aa		12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	ACTN1	P12814	892 aa		12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	PURA	Q00577	322 aa	Known RBP	12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	GUCY1B3	Q02153	619 aa		12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	BTNL9	Q6UXG8	535 aa		12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	SLC30A10	Q6XR72	485 aa		12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	RNF207	Q6ZRF8	634 aa		12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	DEFB128	Q7Z7B8	93 aa		12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	CMTR1	Q8N1G2	835 aa	Known RBP	12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	GPT2	Q8TD30	523 aa		12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	ZNF396	Q96N95	335 aa	Predicted RBP	12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	MTG1	Q9BT17	334 aa	Predicted RBP	12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806	GJB4	Q9NTQ9	266 aa		12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806		V9GY48	417 aa	Predicted RBP	12.43	□□□□□ -0.42
GPAT4-210	ENST00000521806		B4DLN1	442 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	NKRF	O15226	690 aa	Known RBP eCLIP	12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	MMP1	P03956	469 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	MYOG	P15173	224 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	MRPL12	P52815	198 aa	Known RBP	12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	UBE2H	P62256	183 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	AKAP17A	Q02040	695 aa	Known RBP	12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	TRIM29	Q14134	588 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	SKIV2L	Q15477	1246 aa	Known RBP	12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	SLC35G1	Q2M3R5	365 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	STAG2	Q8N3U4	1231 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	RETREG2	Q8NC44	543 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	LEO1	Q8WVC0	666 aa	Predicted RBP	12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	UHRF1	Q96T88	793 aa	Predicted RBP	12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	SPZ1	Q9BXG8	430 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	GDPD2	Q9HCC8	539 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	NOD1	Q9Y239	953 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	GBF1	Q92538	1859 aa		12.42	□□□□□ -0.42
GPAT4-210	ENST00000521806	RBM47	A0AV96	593 aa	Known RBP	12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	KIF28P	B7ZC32	967 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	KPNA6	O60684	536 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	GADD45B	O75293	160 aa	Predicted RBP	12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	COL9A1	P20849	921 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	RFC2	P35250	354 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	FOSB	P53539	338 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	CHMP4BP1	P59074	171 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	TTLL4	Q14679	1199 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	PFKFB3	Q16875	520 aa	Predicted RBP	12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	NBPF20	Q3BBV1	942 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	MYSM1	Q5VVJ2	828 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	CCDC82	Q8N4S0	544 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	DNER	Q8NFT8	737 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	SCFD2	Q8WU76	684 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	PHF20	Q9BVI0	1012 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.41	□□□□□ -0.42	2e-11	■□□□□ 11.1
GPAT4-210	ENST00000521806	FOXP1	Q9H334	677 aa	Predicted RBP	12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	RIOX1	Q9H6W3	641 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	SH3GLB2	Q9NR46	395 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	RTEL1	Q9NZ71	1219 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	TFIP11	Q9UBB9	837 aa	Known RBP	12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	LCT	P09848	1927 aa		12.41	□□□□□ -0.42
GPAT4-210	ENST00000521806	FIBP	O43427	364 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	CYTH3	O43739	400 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	GTPBP6	O43824	516 aa	Predicted RBP	12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	CA3	P07451	260 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	PARP1	P09874	1014 aa	Known RBP	12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	TXN	P10599	105 aa	Known RBP	12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	PDHB	P11177	359 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	SCG2	P13521	617 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	XBP1	P17861	261 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	NCL	P19338	710 aa	Known RBP	12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	RPS6	P62753	249 aa	Known RBP	12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	GSE1	Q14687	1217 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	SAFB	Q15424	915 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	AAK1	Q2M2I8	961 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	ASPRV1	Q53RT3	343 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	NFRKB	Q6P4R8	1299 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	CLEC4D	Q8WXI8	215 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	USP28	Q96RU2	1077 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	SLC9A7	Q96T83	725 aa		12.4	□□□□□ -0.42
GPAT4-210	ENST00000521806	BAZ2B	Q9UIF8	2168 aa	Known RBP	12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806		A6NJR5	290 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	KLRF2	D3W0D1	207 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	PITPNM1	O00562	1244 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	YEATS4	O95619	227 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	IQCF3	P0C7M6	154 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	NASP	P49321	788 aa	Predicted RBP	12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	PTPN11	Q06124	597 aa	Predicted RBP	12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	ZNF543	Q08ER8	600 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	BFSP2	Q13515	415 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	NPY5R	Q15761	445 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	USH1G	Q495M9	461 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	CCDC155	Q8N6L0	562 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	PPP1R13L	Q8WUF5	828 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	SPATA32	Q96LK8	384 aa		12.39	□□□□□ -0.43
GPAT4-210	ENST00000521806	BTBD18	B2RXH4	712 aa		12.38	□□□□□ -0.43
GPAT4-210	ENST00000521806	EDNRB	P24530	442 aa		12.38	□□□□□ -0.43
GPAT4-210	ENST00000521806	GPATCH4	Q5T3I0	446 aa	Known RBP	12.38	□□□□□ -0.43
GPAT4-210	ENST00000521806	NOSTRIN	Q8IVI9	506 aa		12.38	□□□□□ -0.43
GPAT4-210	ENST00000521806	DIS3L2	Q8IYB7	885 aa	Known RBP	12.38	□□□□□ -0.43
GPAT4-210	ENST00000521806	PHOSPHO2	Q8TCD6	241 aa		12.38	□□□□□ -0.43
GPAT4-210	ENST00000521806	COPS5	Q92905	334 aa		12.38	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms