RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 FOXP1Q9H334 677 aaPredicted RBP25.67■■□□□ 1.7
SKP1-206ENST00000519321 AGO4Q9HCK5 861 aaKnown RBP25.67■■□□□ 1.7
SKP1-206ENST00000519321 CYP3A7-CYP3A51PA0A087WV96 503 aa25.66■■□□□ 1.7
SKP1-206ENST00000519321 ATP9AO75110 1047 aa25.66■■□□□ 1.7
SKP1-206ENST00000519321 ARP10275 920 aa25.66■■□□□ 1.7
SKP1-206ENST00000519321 CYP3A7P24462 503 aa25.66■■□□□ 1.7
SKP1-206ENST00000519321 PURAQ00577 322 aaKnown RBP25.66■■□□□ 1.7
SKP1-206ENST00000519321 GNL2Q13823 731 aaKnown RBP25.66■■□□□ 1.7
SKP1-206ENST00000519321 PRR16Q569H4 304 aa25.66■■□□□ 1.7
SKP1-206ENST00000519321 C1orf53Q5VUE5 145 aa25.66■■□□□ 1.7
SKP1-206ENST00000519321 CXCL17Q6UXB2 119 aa25.66■■□□□ 1.7
SKP1-206ENST00000519321 SLC39A5Q6ZMH5 540 aa25.66■■□□□ 1.7
SKP1-206ENST00000519321 MTG1Q9BT17 334 aaPredicted RBP25.66■■□□□ 1.7
SKP1-206ENST00000519321 A0A0U1RQG5 324 aaPredicted RBP25.65■■□□□ 1.7
SKP1-206ENST00000519321 HOXD8P13378 290 aaPredicted RBP25.65■■□□□ 1.7
SKP1-206ENST00000519321 GCFC2P16383 781 aaKnown RBP25.65■■□□□ 1.7
SKP1-206ENST00000519321 HSDL1Q3SXM5 330 aa25.65■■□□□ 1.7
SKP1-206ENST00000519321 Q4G0T1 1027 aa25.65■■□□□ 1.7
SKP1-206ENST00000519321 PKD2L1Q9P0L9 805 aa25.65■■□□□ 1.7
SKP1-206ENST00000519321 ATN1P54259 1190 aaPredicted RBP25.64■■□□□ 1.7
SKP1-206ENST00000519321 SNX17Q15036 470 aa25.64■■□□□ 1.7
SKP1-206ENST00000519321 LETM2Q2VYF4 491 aa25.64■■□□□ 1.7
SKP1-206ENST00000519321 PPP4R3AQ6IN85 833 aa25.64■■□□□ 1.7
SKP1-206ENST00000519321 ZNF577Q9BSK1 485 aa25.64■■□□□ 1.7
SKP1-206ENST00000519321 JPH1Q9HDC5 661 aaPredicted RBP25.64■■□□□ 1.7
SKP1-206ENST00000519321 TBC1D22BQ9NU19 505 aa25.64■■□□□ 1.7
SKP1-206ENST00000519321 H3BQV1 296 aa25.63■■□□□ 1.69
SKP1-206ENST00000519321 IPO5O00410 1097 aaKnown RBP25.63■■□□□ 1.69
SKP1-206ENST00000519321 EDIL3O43854 480 aa25.63■■□□□ 1.69
SKP1-206ENST00000519321 SORBS3O60504 671 aa25.63■■□□□ 1.69
SKP1-206ENST00000519321 PDCP20941 246 aa25.63■■□□□ 1.69
SKP1-206ENST00000519321 LARP1BQ659C4 914 aaKnown RBP25.63■■□□□ 1.69
SKP1-206ENST00000519321 DPF3Q92784 378 aa25.63■■□□□ 1.69
SKP1-206ENST00000519321 MBOAT7Q96N66 472 aa25.63■■□□□ 1.69
SKP1-206ENST00000519321 KATNAL1Q9BW62 490 aa25.63■■□□□ 1.69
SKP1-206ENST00000519321 SLC9A2Q9UBY0 812 aa25.63■■□□□ 1.69
SKP1-206ENST00000519321 TCEAL9Q9UHQ7 104 aa25.63■■□□□ 1.69
SKP1-206ENST00000519321 MROH7Q68CQ1 1323 aa25.63■■□□□ 1.69
SKP1-206ENST00000519321 LRRC26Q2I0M4 334 aa25.62■■□□□ 1.69
SKP1-206ENST00000519321 LENG9Q96B70 501 aa25.62■■□□□ 1.69
SKP1-206ENST00000519321 GPR20Q99678 358 aa25.62■■□□□ 1.69
SKP1-206ENST00000519321 DDX25Q9UHL0 483 aaKnown RBP25.62■■□□□ 1.69
SKP1-206ENST00000519321 ARVCFO00192 962 aa25.61■■□□□ 1.69
SKP1-206ENST00000519321 EVI5O60447 810 aa25.61■■□□□ 1.69
SKP1-206ENST00000519321 CCNT1O60563 726 aaKnown RBP25.61■■□□□ 1.69
SKP1-206ENST00000519321 TDP2O95551 362 aa25.61■■□□□ 1.69
SKP1-206ENST00000519321 EARS2Q5JPH6 523 aaKnown RBP25.61■■□□□ 1.69
SKP1-206ENST00000519321 SEPT1Q8WYJ6 367 aa25.61■■□□□ 1.69
SKP1-206ENST00000519321 BCAS3Q9H6U6 928 aa25.61■■□□□ 1.69
SKP1-206ENST00000519321 NR2E3Q9Y5X4 410 aa25.61■■□□□ 1.69
SKP1-206ENST00000519321 U2AF2P26368 475 aaKnown RBP eCLIP25.6■■□□□ 1.691e-9■■■■□ 21.1
SKP1-206ENST00000519321 RTP1P59025 263 aa25.6■■□□□ 1.69
SKP1-206ENST00000519321 SP4Q02446 784 aa25.6■■□□□ 1.69
SKP1-206ENST00000519321 ITGB3BPQ13352 177 aaPredicted RBP25.6■■□□□ 1.69
SKP1-206ENST00000519321 ITGA7Q13683 1181 aa25.6■■□□□ 1.69
SKP1-206ENST00000519321 NOSTRINQ8IVI9 506 aa25.6■■□□□ 1.69
SKP1-206ENST00000519321 RIT2Q99578 217 aa25.6■■□□□ 1.69
SKP1-206ENST00000519321 DOCK5Q9H7D0 1870 aa25.6■■□□□ 1.69
SKP1-206ENST00000519321 MSH4O15457 936 aa25.59■■□□□ 1.69
SKP1-206ENST00000519321 HSP90AA1P07900 732 aaKnown RBP25.59■■□□□ 1.69
SKP1-206ENST00000519321 SLC43A3Q8NBI5 491 aa25.59■■□□□ 1.69
SKP1-206ENST00000519321 TOX2Q96NM4 488 aa25.59■■□□□ 1.69
SKP1-206ENST00000519321 ATP11BQ9Y2G3 1177 aa25.59■■□□□ 1.69
SKP1-206ENST00000519321 FAM205CA6NFA0 338 aa25.58■■□□□ 1.69
SKP1-206ENST00000519321 DHX15O43143 795 aaKnown RBP25.58■■□□□ 1.69
SKP1-206ENST00000519321 F2P00734 622 aa25.58■■□□□ 1.69
SKP1-206ENST00000519321 TRAPPC10P48553 1259 aa25.58■■□□□ 1.69
SKP1-206ENST00000519321 CDK7P50613 346 aa25.58■■□□□ 1.69
SKP1-206ENST00000519321 SLC5A5Q92911 643 aa25.58■■□□□ 1.69
SKP1-206ENST00000519321 ZNF215Q9UL58 517 aaPredicted RBP25.58■■□□□ 1.69
SKP1-206ENST00000519321 NOL7Q9UMY1 257 aaKnown RBP25.58■■□□□ 1.69
SKP1-206ENST00000519321 DCDC2CA8MYV0 355 aa25.57■■□□□ 1.68
SKP1-206ENST00000519321 TBX3O15119 743 aa25.57■■□□□ 1.68
SKP1-206ENST00000519321 LGALS2P05162 132 aa25.57■■□□□ 1.68
SKP1-206ENST00000519321 TCF7P36402 384 aaPredicted RBP25.57■■□□□ 1.68
SKP1-206ENST00000519321 PSMC6P62333 389 aa25.57■■□□□ 1.68
SKP1-206ENST00000519321 KRT76Q01546 638 aa25.57■■□□□ 1.68
SKP1-206ENST00000519321 PTPN11Q06124 597 aaPredicted RBP25.57■■□□□ 1.68
SKP1-206ENST00000519321 ORC2Q13416 577 aaPredicted RBP25.57■■□□□ 1.68
SKP1-206ENST00000519321 TRIM60Q495X7 471 aa25.57■■□□□ 1.68
SKP1-206ENST00000519321 MCTP1Q6DN14 999 aa25.57■■□□□ 1.68
SKP1-206ENST00000519321 ZNF746Q6NUN9 644 aaPredicted RBP25.57■■□□□ 1.68
SKP1-206ENST00000519321 NFRKBQ6P4R8 1299 aa25.57■■□□□ 1.68
SKP1-206ENST00000519321 ANKRD33Q7Z3H0 272 aa25.57■■□□□ 1.68
SKP1-206ENST00000519321 FAM20AQ96MK3 541 aa25.57■■□□□ 1.68
SKP1-206ENST00000519321 SCN10AQ9Y5Y9 1956 aa25.56■■□□□ 1.68
SKP1-206ENST00000519321 GSTTP1A0A1W2PQM5 241 aa25.56■■□□□ 1.68
SKP1-206ENST00000519321 DDX39AO00148 427 aaKnown RBP25.56■■□□□ 1.68
SKP1-206ENST00000519321 TLR3O15455 904 aaKnown RBP25.56■■□□□ 1.68
SKP1-206ENST00000519321 GAS7O60861 476 aa25.56■■□□□ 1.68
SKP1-206ENST00000519321 ZNF286BP0CG31 522 aa25.56■■□□□ 1.68
SKP1-206ENST00000519321 PSEN2P49810 448 aa25.56■■□□□ 1.68
SKP1-206ENST00000519321 ACTR2P61160 394 aa25.56■■□□□ 1.68
SKP1-206ENST00000519321 NBPF20Q3BBV1 942 aa25.56■■□□□ 1.68
SKP1-206ENST00000519321 LRCH2Q5VUJ6 765 aa25.56■■□□□ 1.68
SKP1-206ENST00000519321 SMAP1Q8IYB5 467 aaPredicted RBP25.56■■□□□ 1.68
SKP1-206ENST00000519321 KAT2BQ92831 832 aa25.56■■□□□ 1.68
SKP1-206ENST00000519321 C16orf70Q9BSU1 422 aa25.56■■□□□ 1.68
SKP1-206ENST00000519321 TEKT3Q9BXF9 490 aa25.56■■□□□ 1.68
SKP1-206ENST00000519321 ALPK3Q96L96 1907 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms