RNA–Protein interactions for RNA: ENST00000506563.5

CDK7-204, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-204ENST00000506563 SPATA32Q96LK8 384 aa14.4□□□□□ -0.1
CDK7-204ENST00000506563 TEKT3Q9BXF9 490 aa14.4□□□□□ -0.1
CDK7-204ENST00000506563 MLXIPQ9HAP2 919 aa14.4□□□□□ -0.1
CDK7-204ENST00000506563 KCNMB3Q9NPA1 279 aa14.4□□□□□ -0.1
CDK7-204ENST00000506563 POLR3EQ9NVU0 708 aa14.4□□□□□ -0.1
CDK7-204ENST00000506563 RNF216Q9NWF9 866 aaPredicted RBP14.4□□□□□ -0.1
CDK7-204ENST00000506563 TCHHQ07283 1943 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 RBM47A0AV96 593 aaKnown RBP14.39□□□□□ -0.11
CDK7-204ENST00000506563 SPTLC2O15270 562 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 BMP15O95972 392 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 GH1P01241 217 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 TECP42680 631 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 NASPP49321 788 aaPredicted RBP14.39□□□□□ -0.11
CDK7-204ENST00000506563 NEDD9Q14511 834 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 SLC39A14Q15043 492 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 MTFR1Q15390 333 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 PKN2Q16513 984 aaKnown RBP14.39□□□□□ -0.11
CDK7-204ENST00000506563 TMEM266Q2M3C6 531 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 ATL3Q6DD88 541 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 NCAPH2Q6IBW4 605 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 CCDC62Q6P9F0 684 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 DTHD1Q6ZMT9 781 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 SLFN12Q8IYM2 578 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 OR6J1Q8NGC5 347 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 FAM20AQ96MK3 541 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 MTMR9Q96QG7 549 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 UNC93B1Q9H1C4 597 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 TTC12Q9H892 705 aaPredicted RBP14.39□□□□□ -0.11
CDK7-204ENST00000506563 JPH1Q9HDC5 661 aaPredicted RBP14.39□□□□□ -0.11
CDK7-204ENST00000506563 HMX1Q9NP08 348 aaPredicted RBP14.39□□□□□ -0.11
CDK7-204ENST00000506563 NRBP1Q9UHY1 535 aa14.39□□□□□ -0.11
CDK7-204ENST00000506563 LAD1O00515 517 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 TBX3O15119 743 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 SEPT4O43236 478 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 DYNC1LI2O43237 492 aaPredicted RBP14.38□□□□□ -0.11
CDK7-204ENST00000506563 YEATS4O95619 227 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 TGFB3P10600 412 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 RARBP10826 455 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 ME1P48163 572 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 DUSP28Q4G0W2 176 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 CELF3Q5SZQ8 465 aaKnown RBP14.38□□□□□ -0.11
CDK7-204ENST00000506563 MAP3K21Q5TCX8 1036 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 TLK2Q86UE8 772 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 LINC00301Q8NCQ3 95 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 LEO1Q8WVC0 666 aaPredicted RBP14.38□□□□□ -0.11
CDK7-204ENST00000506563 SPATA33Q96N06 139 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 MCOLN1Q9GZU1 580 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.38□□□□□ -0.11
CDK7-204ENST00000506563 AP5M1Q9H0R1 490 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 UNC45AQ9H3U1 944 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 TBC1D22BQ9NU19 505 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 SLC9A2Q9UBY0 812 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 PCDHA12Q9UN75 941 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 TELO2Q9Y4R8 837 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 SAMM50Q9Y512 469 aa14.38□□□□□ -0.11
CDK7-204ENST00000506563 POTEMA6NI47 508 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 NOP56O00567 594 aaKnown RBP14.37□□□□□ -0.11
CDK7-204ENST00000506563 DHX15O43143 795 aaKnown RBP14.37□□□□□ -0.11
CDK7-204ENST00000506563 PSMD10O75832 226 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 FARP2O94887 1054 aaPredicted RBP14.37□□□□□ -0.11
CDK7-204ENST00000506563 CCL5P13501 91 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 IRX5P78411 483 aaPredicted RBP14.37□□□□□ -0.11
CDK7-204ENST00000506563 GRIN1Q05586 938 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 ARHGAP1Q07960 439 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 IL17AQ16552 155 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 SPECC1Q5M775 1068 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 MIER3Q7Z3K6 550 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 GIMAP8Q8ND71 665 aaPredicted RBP14.37□□□□□ -0.11
CDK7-204ENST00000506563 KCNG4Q8TDN1 519 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 CLIC6Q96NY7 704 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 RIT2Q99578 217 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 SENP7Q9BQF6 1050 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 SCAND2PQ9GZW5 306 aaPredicted RBP14.37□□□□□ -0.11
CDK7-204ENST00000506563 RNF208Q9H0X6 261 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 DDX20Q9UHI6 824 aaKnown RBP14.37□□□□□ -0.11
CDK7-204ENST00000506563 NFASCO94856 1347 aa14.37□□□□□ -0.11
CDK7-204ENST00000506563 NKRFO15226 690 aaKnown RBP eCLIP14.36□□□□□ -0.11
CDK7-204ENST00000506563 PGK1P00558 417 aa14.36□□□□□ -0.11
CDK7-204ENST00000506563 PRPHP41219 470 aa14.36□□□□□ -0.11
CDK7-204ENST00000506563 BEX3Q00994 111 aa14.36□□□□□ -0.11
CDK7-204ENST00000506563 LAMC2Q13753 1193 aa14.36□□□□□ -0.11
CDK7-204ENST00000506563 ZRSR1Q15695 479 aaKnown RBP14.36□□□□□ -0.11
CDK7-204ENST00000506563 UTP14CQ5TAP6 766 aaKnown RBP14.36□□□□□ -0.11
CDK7-204ENST00000506563 METTL7BQ6UX53 244 aa14.36□□□□□ -0.11
CDK7-204ENST00000506563 KRI1Q8N9T8 703 aaKnown RBP14.36□□□□□ -0.11
CDK7-204ENST00000506563 AFG1LQ8WV93 481 aa14.36□□□□□ -0.11
CDK7-204ENST00000506563 XPNPEP3Q9NQH7 507 aa14.36□□□□□ -0.11
CDK7-204ENST00000506563 FBXO2Q9UK22 296 aaPredicted RBP14.36□□□□□ -0.11
CDK7-204ENST00000506563 RCOR1Q9UKL0 485 aa14.36□□□□□ -0.11
CDK7-204ENST00000506563 VAV3Q9UKW4 847 aa14.36□□□□□ -0.11
CDK7-204ENST00000506563 GNEQ9Y223 722 aaKnown RBP14.36□□□□□ -0.11
CDK7-204ENST00000506563 PP2D1A8MPX8 630 aa14.35□□□□□ -0.11
CDK7-204ENST00000506563 EML1O00423 815 aa14.35□□□□□ -0.11
CDK7-204ENST00000506563 DUSP11O75319 330 aaKnown RBP14.35□□□□□ -0.11
CDK7-204ENST00000506563 CCNE2O96020 404 aa14.35□□□□□ -0.11
CDK7-204ENST00000506563 C6orf222P0C671 652 aaPredicted RBP14.35□□□□□ -0.11
CDK7-204ENST00000506563 CDC25AP30304 524 aa14.35□□□□□ -0.11
CDK7-204ENST00000506563 CHMP4BP1P59074 171 aa14.35□□□□□ -0.11
CDK7-204ENST00000506563 ACTR2P61160 394 aa14.35□□□□□ -0.11
CDK7-204ENST00000506563 KRT76Q01546 638 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms