RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 ANKRD13AQ8IZ07 590 aa27.5■■□□□ 1.99
DHFR-203ENST00000505337 P2RX5Q93086 422 aa27.5■■□□□ 1.99
DHFR-203ENST00000505337 DNAJC19Q96DA6 116 aa27.5■■□□□ 1.99
DHFR-203ENST00000505337 SLC10A4Q96EP9 437 aa27.5■■□□□ 1.99
DHFR-203ENST00000505337 SLC38A10Q9HBR0 1119 aa27.5■■□□□ 1.99
DHFR-203ENST00000505337 STK24Q9Y6E0 443 aa27.5■■□□□ 1.99
DHFR-203ENST00000505337 MKRN3Q13064 507 aaKnown RBP27.49■■□□□ 1.99
DHFR-203ENST00000505337 FILIP1LQ4L180 1135 aa27.49■■□□□ 1.99
DHFR-203ENST00000505337 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.49■■□□□ 1.99
DHFR-203ENST00000505337 DYMQ7RTS9 669 aa27.49■■□□□ 1.99
DHFR-203ENST00000505337 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.49■■□□□ 1.991e-9■■□□□ 13.5
DHFR-203ENST00000505337 WRNIP1Q96S55 665 aa27.49■■□□□ 1.99
DHFR-203ENST00000505337 DUSP9Q99956 384 aaKnown RBP27.49■■□□□ 1.99
DHFR-203ENST00000505337 PPP1R9AQ9ULJ8 1098 aa27.49■■□□□ 1.99
DHFR-203ENST00000505337 KIAA1024Q9UPX6 916 aa27.49■■□□□ 1.99
DHFR-203ENST00000505337 BICDL2A1A5D9 508 aa27.48■■□□□ 1.99
DHFR-203ENST00000505337 ZNF76P36508 570 aa27.48■■□□□ 1.99
DHFR-203ENST00000505337 CTCFP49711 727 aaPredicted RBP27.48■■□□□ 1.99
DHFR-203ENST00000505337 TERF1P54274 439 aa27.48■■□□□ 1.99
DHFR-203ENST00000505337 DNTTIP2Q5QJE6 756 aaKnown RBP27.48■■□□□ 1.99
DHFR-203ENST00000505337 SPRYD7Q5W111 196 aa27.48■■□□□ 1.99
DHFR-203ENST00000505337 ERMNQ8TAM6 284 aa27.48■■□□□ 1.99
DHFR-203ENST00000505337 NOC3LQ8WTT2 800 aaKnown RBP27.48■■□□□ 1.99
DHFR-203ENST00000505337 CLEC4DQ8WXI8 215 aa27.48■■□□□ 1.99
DHFR-203ENST00000505337 TRIM47Q96LD4 638 aa27.48■■□□□ 1.99
DHFR-203ENST00000505337 BEGAINQ9BUH8 593 aa27.48■■□□□ 1.99
DHFR-203ENST00000505337 TANGO6Q9C0B7 1094 aa27.48■■□□□ 1.99
DHFR-203ENST00000505337 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.48■■□□□ 1.99
DHFR-203ENST00000505337 ITIH6Q6UXX5 1313 aa27.48■■□□□ 1.99
DHFR-203ENST00000505337 RPTORQ8N122 1335 aa27.48■■□□□ 1.99
DHFR-203ENST00000505337 E9PMD0 336 aa27.47■■□□□ 1.99
DHFR-203ENST00000505337 NRDCO43847 1150 aa27.47■■□□□ 1.99
DHFR-203ENST00000505337 PTPRAP18433 802 aa27.47■■□□□ 1.99
DHFR-203ENST00000505337 RPA1P27694 616 aa27.47■■□□□ 1.99
DHFR-203ENST00000505337 COPB1P53618 953 aaKnown RBP27.47■■□□□ 1.99
DHFR-203ENST00000505337 NCAPH2Q6IBW4 605 aa27.47■■□□□ 1.99
DHFR-203ENST00000505337 ANKRD20A12PQ8NF67 263 aa27.47■■□□□ 1.99
DHFR-203ENST00000505337 HPS3Q969F9 1004 aa27.47■■□□□ 1.99
DHFR-203ENST00000505337 AS3MTQ9HBK9 375 aa27.47■■□□□ 1.99
DHFR-203ENST00000505337 R3HCC1Q9Y3T6 440 aaKnown RBP27.47■■□□□ 1.99
DHFR-203ENST00000505337 HSPA8P11142 646 aaKnown RBP27.47■■□□□ 1.99
DHFR-203ENST00000505337 EEF1GP26641 437 aaKnown RBP27.47■■□□□ 1.99
DHFR-203ENST00000505337 CATSPER3Q86XQ3 398 aa27.47■■□□□ 1.99
DHFR-203ENST00000505337 TMEM139Q8IV31 216 aa27.47■■□□□ 1.99
DHFR-203ENST00000505337 TC2NQ8N9U0 490 aa27.47■■□□□ 1.99
DHFR-203ENST00000505337 RPAP3Q9H6T3 665 aaPredicted RBP27.47■■□□□ 1.99
DHFR-203ENST00000505337 POTEFA5A3E0 1075 aa27.46■■□□□ 1.99
DHFR-203ENST00000505337 USP27XA6NNY8 438 aa27.46■■□□□ 1.99
DHFR-203ENST00000505337 PLA2G4BP0C869 781 aa27.46■■□□□ 1.99
DHFR-203ENST00000505337 SPATA31C1P0DKV0 1188 aa27.46■■□□□ 1.99
DHFR-203ENST00000505337 BACE1P56817 501 aa27.46■■□□□ 1.99
DHFR-203ENST00000505337 MAP3K9P80192 1104 aa27.46■■□□□ 1.99
DHFR-203ENST00000505337 SPP2Q13103 211 aa27.46■■□□□ 1.99
DHFR-203ENST00000505337 PSMD2Q13200 908 aa27.46■■□□□ 1.99
DHFR-203ENST00000505337 COL13A1Q5TAT6 717 aaPredicted RBP27.46■■□□□ 1.99
DHFR-203ENST00000505337 POTEGQ6S5H5 508 aa27.46■■□□□ 1.99
DHFR-203ENST00000505337 POTEEQ6S8J3 1075 aa27.46■■□□□ 1.99
DHFR-203ENST00000505337 ZKSCAN4Q969J2 545 aaPredicted RBP27.46■■□□□ 1.99
DHFR-203ENST00000505337 SLC39A2Q9NP94 309 aa27.46■■□□□ 1.99
DHFR-203ENST00000505337 NFIBO00712 420 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 FLOT1O75955 427 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 GJA5P36382 358 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 GOLGA8FQ08AF8 430 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 GOLGA8DPQ0D2H9 430 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 VGLL4Q14135 290 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 CCAR2Q8N163 923 aaKnown RBP27.45■■□□□ 1.99
DHFR-203ENST00000505337 GUF1Q8N442 669 aaKnown RBP27.45■■□□□ 1.99
DHFR-203ENST00000505337 ZNF280CQ8ND82 737 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 SLC5A5Q92911 643 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 WNK4Q96J92 1243 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 C12orf42Q96LP6 360 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 PICK1Q9NRD5 415 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 TAB2Q9NYJ8 693 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 TSKSQ9UJT2 592 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 RABGAP1Q9Y3P9 1069 aa27.45■■□□□ 1.99
DHFR-203ENST00000505337 PSMD10O75832 226 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 LBX1P52954 281 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 SLC12A3P55017 1021 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 SETQ01105 290 aaPredicted RBP27.44■■□□□ 1.98
DHFR-203ENST00000505337 COASYQ13057 564 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 CEP55Q53EZ4 464 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 E4F1Q66K89 784 aaPredicted RBP27.44■■□□□ 1.98
DHFR-203ENST00000505337 CENPPQ6IPU0 288 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 ELP3Q9H9T3 547 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 COL20A1Q9P218 1284 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 FRMPD4Q14CM0 1322 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 IDEP14735 1019 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 CYP11B2P19099 503 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 NOL9Q5SY16 702 aaKnown RBP27.44■■□□□ 1.98
DHFR-203ENST00000505337 ANKRD40Q6AI12 368 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 REM2Q8IYK8 340 aaPredicted RBP27.44■■□□□ 1.98
DHFR-203ENST00000505337 CSGALNACT2Q8N6G5 542 aa27.44■■□□□ 1.98
DHFR-203ENST00000505337 POLR3CQ9BUI4 534 aaPredicted RBP27.44■■□□□ 1.98
DHFR-203ENST00000505337 SRRTQ9BXP5 876 aaKnown RBP27.44■■□□□ 1.98
DHFR-203ENST00000505337 WDR81Q562E7 1941 aa27.43■■□□□ 1.98
DHFR-203ENST00000505337 A0A0G2JMZ2 1700 aa27.43■■□□□ 1.98
DHFR-203ENST00000505337 N4BP3O15049 544 aa27.43■■□□□ 1.98
DHFR-203ENST00000505337 CA12O43570 354 aa27.43■■□□□ 1.98
DHFR-203ENST00000505337 FDX1P10109 184 aa27.43■■□□□ 1.98
DHFR-203ENST00000505337 UBXN2AP68543 259 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms