RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 TTC38Q5R3I4 469 aa16.38■□□□□ 0.21
USP11-212ENST00000497179 CYFIP1Q7L576 1253 aa16.38■□□□□ 0.21
USP11-212ENST00000497179 FERMT3Q86UX7 667 aa16.38■□□□□ 0.21
USP11-212ENST00000497179 ETNPPLQ8TBG4 499 aa16.38■□□□□ 0.21
USP11-212ENST00000497179 SLC5A5Q92911 643 aa16.38■□□□□ 0.21
USP11-212ENST00000497179 ZNF577Q9BSK1 485 aa16.38■□□□□ 0.21
USP11-212ENST00000497179 BCAS3Q9H6U6 928 aa16.38■□□□□ 0.21
USP11-212ENST00000497179 MLXIPQ9HAP2 919 aa16.38■□□□□ 0.21
USP11-212ENST00000497179 TBX3O15119 743 aa16.37■□□□□ 0.21
USP11-212ENST00000497179 DHX15O43143 795 aaKnown RBP16.37■□□□□ 0.21
USP11-212ENST00000497179 HOXD8P13378 290 aaPredicted RBP16.37■□□□□ 0.21
USP11-212ENST00000497179 ATP2B1P20020 1258 aa16.37■□□□□ 0.21
USP11-212ENST00000497179 SOX10P56693 466 aa16.37■□□□□ 0.21
USP11-212ENST00000497179 BEX3Q00994 111 aa16.37■□□□□ 0.21
USP11-212ENST00000497179 RILPL1Q5EBL4 403 aa16.37■□□□□ 0.21
USP11-212ENST00000497179 CCSAPQ6IQ19 270 aaPredicted RBP16.37■□□□□ 0.21
USP11-212ENST00000497179 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
USP11-212ENST00000497179 PPTC7Q8NI37 304 aa16.37■□□□□ 0.21
USP11-212ENST00000497179 AFG1LQ8WV93 481 aa16.37■□□□□ 0.21
USP11-212ENST00000497179 SDF4Q9BRK5 362 aa16.37■□□□□ 0.21
USP11-212ENST00000497179 TSEN34Q9BSV6 310 aaKnown RBP16.37■□□□□ 0.21
USP11-212ENST00000497179 JPH1Q9HDC5 661 aaPredicted RBP16.37■□□□□ 0.21
USP11-212ENST00000497179 KCNMB3Q9NPA1 279 aa16.37■□□□□ 0.21
USP11-212ENST00000497179 TBC1D22BQ9NU19 505 aa16.37■□□□□ 0.21
USP11-212ENST00000497179 RBM19Q9Y4C8 960 aaKnown RBP16.37■□□□□ 0.21
USP11-212ENST00000497179 DOCK5Q9H7D0 1870 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 KBTBD13C9JR72 458 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 SORBS3O60504 671 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 NEMFO60524 1076 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 MMP3P08254 477 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 ZSCAN22P10073 491 aaPredicted RBP16.36■□□□□ 0.21
USP11-212ENST00000497179 EN2P19622 333 aaPredicted RBP16.36■□□□□ 0.21
USP11-212ENST00000497179 HSDL1Q3SXM5 330 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 BRDTQ58F21 947 aaPredicted RBP16.36■□□□□ 0.21
USP11-212ENST00000497179 GNASQ5JWF2 1037 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 PCSK9Q8NBP7 692 aaKnown RBP16.36■□□□□ 0.21
USP11-212ENST00000497179 FAM20AQ96MK3 541 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 SPATA33Q96N06 139 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 RIT2Q99578 217 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 ZSCAN16Q9H4T2 348 aaPredicted RBP16.36■□□□□ 0.21
USP11-212ENST00000497179 SLC9A2Q9UBY0 812 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 PHF24Q9UPV7 400 aa16.36■□□□□ 0.21
USP11-212ENST00000497179 KIAA0100Q14667 2235 aaKnown RBP16.35■□□□□ 0.21
USP11-212ENST00000497179 MOXD2PA6NHM9 499 aa16.35■□□□□ 0.21
USP11-212ENST00000497179 ZEB2O60315 1214 aa16.35■□□□□ 0.21
USP11-212ENST00000497179 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
USP11-212ENST00000497179 MCM7P33993 719 aa16.35■□□□□ 0.21
USP11-212ENST00000497179 PKP1Q13835 747 aa16.35■□□□□ 0.21
USP11-212ENST00000497179 NBR1Q14596 966 aa16.35■□□□□ 0.21
USP11-212ENST00000497179 LRCH2Q5VUJ6 765 aa16.35■□□□□ 0.21
USP11-212ENST00000497179 UBE2Q1Q7Z7E8 422 aa16.35■□□□□ 0.21
USP11-212ENST00000497179 UIMC1Q96RL1 719 aa16.35■□□□□ 0.21
USP11-212ENST00000497179 GPR20Q99678 358 aa16.35■□□□□ 0.21
USP11-212ENST00000497179 POLR3EQ9NVU0 708 aa16.35■□□□□ 0.21
USP11-212ENST00000497179 NOP56O00567 594 aaKnown RBP16.34■□□□□ 0.21
USP11-212ENST00000497179 KPNA6O60684 536 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 GAS7O60861 476 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 PSMD10O75832 226 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 ASGR1P07306 291 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 COL6A1P12109 1028 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 DDIT3P35638 169 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 ACLYP53396 1101 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 KRT76Q01546 638 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 ZNF174Q15697 407 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 KCNA10Q16322 511 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 CALCRLQ16602 461 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 ZNF746Q6NUN9 644 aaPredicted RBP16.34■□□□□ 0.21
USP11-212ENST00000497179 DIS3LQ8TF46 1054 aaKnown RBP16.34■□□□□ 0.21
USP11-212ENST00000497179 HAS1Q92839 578 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 MTMR9Q96QG7 549 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 TEKT3Q9BXF9 490 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 TMEM60Q9H2L4 133 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.34■□□□□ 0.21
USP11-212ENST00000497179 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
USP11-212ENST00000497179 TELO2Q9Y4R8 837 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 PCDHB6Q9Y5E3 794 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 ELP1O95163 1332 aa16.34■□□□□ 0.21
USP11-212ENST00000497179 DDX39AO00148 427 aaKnown RBP16.33■□□□□ 0.2
USP11-212ENST00000497179 PPFIA4O75335 1185 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 BAG4O95429 457 aaKnown RBP16.33■□□□□ 0.2
USP11-212ENST00000497179 BRD1O95696 1058 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 CCNE2O96020 404 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 F13A1P00488 732 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 ACTR2P61160 394 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 PURAQ00577 322 aaKnown RBP16.33■□□□□ 0.2
USP11-212ENST00000497179 SP4Q02446 784 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 DGKDQ16760 1214 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 B3GNT9Q6UX72 402 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 SLFN12Q8IYM2 578 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 C4orf32Q8N8J7 132 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 GJA10Q969M2 543 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 TCEAL9Q9UHQ7 104 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 VAV3Q9UKW4 847 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 DNAH12Q6ZR08 3092 aa16.33■□□□□ 0.2
USP11-212ENST00000497179 A0A1W2PQ45 241 aaPredicted RBP16.32■□□□□ 0.2
USP11-212ENST00000497179 GSTTP1A0A1W2PQM5 241 aa16.32■□□□□ 0.2
USP11-212ENST00000497179 A0A1W2PQY0 241 aa16.32■□□□□ 0.2
USP11-212ENST00000497179 CABYRO75952 493 aa16.32■□□□□ 0.2
USP11-212ENST00000497179 MYL3P08590 195 aa16.32■□□□□ 0.2
USP11-212ENST00000497179 OR52Z1P0C646 297 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms