RNA–Protein interactions for RNA: ENST00000497122.5

SOX2-OT-216, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 578 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-216ENST00000497122 KCNT2Q6UVM3 1135 aa6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 FKBP9P1Q75LS8 142 aa6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 PNMA8AQ86V59 439 aaPredicted RBP6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 ZC3H7AQ8IWR0 971 aaKnown RBP6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 LILRA2Q8N149 483 aa6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 ARHGEF39Q8N4T4 335 aa6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 FIBCD1Q8N539 461 aa6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 SVIPQ8NHG7 77 aa6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 SLC39A13Q96H72 371 aa6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 RCC1LQ96I51 464 aaKnown RBP6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 ASPNQ9BXN1 380 aa6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 THG1LQ9NWX6 298 aaKnown RBP6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 FAM50BQ9Y247 325 aa6.94□□□□□ -1.3
SOX2-OT-216ENST00000497122 SHISA3A0PJX4 238 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 IFRD1O00458 451 aaPredicted RBP6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 F2P00734 622 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 CAPNS1P04632 268 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 SRGAP2CP0DJJ0 459 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 GLDCP23378 1020 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 HOXC12P31275 282 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 GALK1P51570 392 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 CXorf57Q6NSI4 855 aaKnown RBP6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 C11orf74Q86VG3 221 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 SPPL2CQ8IUH8 684 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 SIRT2Q8IXJ6 389 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 IGSF22Q8N9C0 903 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 CLIP3Q96DZ5 547 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 FUBP3Q96I24 572 aaKnown RBP eCLIP6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 CAMKK2Q96RR4 588 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 KRTAP4-9Q9BYQ8 210 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 NKX2-4Q9H2Z4 354 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 CABP5Q9NP86 173 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 CYP26B1Q9NR63 512 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 GFOD1Q9NXC2 390 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 USP25Q9UHP3 1055 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 PCDHA8Q9Y5H6 950 aa6.93□□□□□ -1.3
SOX2-OT-216ENST00000497122 MEIS1O00470 390 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 MED14OSP0DP75 135 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 RPL10P27635 214 aaKnown RBP6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 IRX6P78412 446 aaPredicted RBP6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 AMPD2Q01433 879 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 CHRNEQ04844 493 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 PICALMQ13492 652 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 MINDY4Q4G0A6 757 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 ABHD17CQ6PCB6 329 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 AHCYL2Q96HN2 611 aaKnown RBP6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 INTS4Q96HW7 963 aaKnown RBP6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 ZNF700Q9H0M5 742 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 PPCSQ9HAB8 311 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 PRDM11Q9NQV5 511 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 PNMA2Q9UL42 364 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 ZBTB21Q9ULJ3 1066 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 COQ6Q9Y2Z9 468 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 DAAM1Q9Y4D1 1078 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 WASHC2AQ641Q2 1341 aa6.92□□□□□ -1.3
SOX2-OT-216ENST00000497122 SSU72P8A0A1W2PR75 194 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 CBX4O00257 560 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 NPHP1O15259 732 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 CPP00450 1065 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 INHBBP09529 407 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 U2AF1L5P0DN76 240 aaPredicted RBP6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 U2AF1Q01081 240 aaKnown RBP eCLIP6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 SCRN1Q12765 414 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 ARHGAP29Q52LW3 1261 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 IRF2BP1Q8IU81 584 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 PPIL6Q8IXY8 311 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 USP33Q8TEY7 942 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 DCAF4Q8WV16 495 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 CHTF18Q8WVB6 975 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 E2F7Q96AV8 911 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 CCDC140Q96MF4 163 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 PHF20Q9BVI0 1012 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 MCOLN1Q9GZU1 580 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 SP110Q9HB58 689 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 VTA1Q9NP79 307 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 RCAN3Q9UKA8 241 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 YBX2Q9Y2T7 364 aaKnown RBP6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 FHOD1Q9Y613 1164 aa6.91□□□□□ -1.3
SOX2-OT-216ENST00000497122 NAT1P18440 290 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 KPNA1P52294 538 aaPredicted RBP6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 PURAQ00577 322 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 TEKQ02763 1124 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 NMIQ13287 307 aaPredicted RBP6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 SNW1Q13573 536 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 PCBP2Q15366 365 aaKnown RBP eCLIP6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 GRAMD1BQ3KR37 738 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 SLC35F1Q5T1Q4 408 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 STYK1Q6J9G0 422 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 PGM2L1Q6PCE3 622 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 ANKS4BQ8N8V4 417 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 SMC1BQ8NDV3 1235 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 C1orf159Q96HA4 380 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 EMC7Q9NPA0 242 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 SPTLC3Q9NUV7 552 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 TAGLN3Q9UI15 199 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 ANKRD6Q9Y2G4 727 aa6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 DIS3Q9Y2L1 958 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 SF3B6Q9Y3B4 125 aaKnown RBP6.9□□□□□ -1.3
SOX2-OT-216ENST00000497122 STXBP3O00186 592 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms