RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 TLK2Q86UE8 772 aa17.81■□□□□ 0.44
HPS4-216ENST00000493455 TEKT3Q9BXF9 490 aa17.81■□□□□ 0.44
HPS4-216ENST00000493455 RARBP10826 455 aa17.8■□□□□ 0.44
HPS4-216ENST00000493455 MARCKSP29966 332 aaPredicted RBP17.8■□□□□ 0.44
HPS4-216ENST00000493455 KRT85P78386 507 aa17.8■□□□□ 0.44
HPS4-216ENST00000493455 NEDD9Q14511 834 aa17.8■□□□□ 0.44
HPS4-216ENST00000493455 CCDC62Q6P9F0 684 aa17.8■□□□□ 0.44
HPS4-216ENST00000493455 ETNPPLQ8TBG4 499 aa17.8■□□□□ 0.44
HPS4-216ENST00000493455 AP5M1Q9H0R1 490 aa17.8■□□□□ 0.44
HPS4-216ENST00000493455 DDX20Q9UHI6 824 aaKnown RBP17.8■□□□□ 0.44
HPS4-216ENST00000493455 NOP56O00567 594 aaKnown RBP17.79■□□□□ 0.44
HPS4-216ENST00000493455 MAFGO15525 162 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 PGK1P00558 417 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 TGFB3P10600 412 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 IRX5P78411 483 aaPredicted RBP17.79■□□□□ 0.44
HPS4-216ENST00000493455 ORC2Q13416 577 aaPredicted RBP17.79■□□□□ 0.44
HPS4-216ENST00000493455 CELF3Q5SZQ8 465 aaKnown RBP17.79■□□□□ 0.44
HPS4-216ENST00000493455 NCAPH2Q6IBW4 605 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 SLFN12Q8IYM2 578 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 HAS1Q92839 578 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 SLC5A5Q92911 643 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 TNPO1Q92973 898 aaKnown RBP17.79■□□□□ 0.44
HPS4-216ENST00000493455 ZNF333Q96JL9 665 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 SPATA33Q96N06 139 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 TTC12Q9H892 705 aaPredicted RBP17.79■□□□□ 0.44
HPS4-216ENST00000493455 JPH1Q9HDC5 661 aaPredicted RBP17.79■□□□□ 0.44
HPS4-216ENST00000493455 KCNMB3Q9NPA1 279 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 XPNPEP3Q9NQH7 507 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 SLC9A2Q9UBY0 812 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 TELO2Q9Y4R8 837 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 SAMM50Q9Y512 469 aa17.79■□□□□ 0.44
HPS4-216ENST00000493455 NKRFO15226 690 aaKnown RBP eCLIP17.78■□□□□ 0.44
HPS4-216ENST00000493455 FARP2O94887 1054 aaPredicted RBP17.78■□□□□ 0.44
HPS4-216ENST00000493455 C6orf222P0C671 652 aaPredicted RBP17.78■□□□□ 0.44
HPS4-216ENST00000493455 TECP42680 631 aa17.78■□□□□ 0.44
HPS4-216ENST00000493455 ATP2C1P98194 919 aaPredicted RBP17.78■□□□□ 0.44
HPS4-216ENST00000493455 BEX3Q00994 111 aa17.78■□□□□ 0.44
HPS4-216ENST00000493455 ARHGAP1Q07960 439 aa17.78■□□□□ 0.44
HPS4-216ENST00000493455 TMEM266Q2M3C6 531 aa17.78■□□□□ 0.44
HPS4-216ENST00000493455 C4orf32Q8N8J7 132 aa17.78■□□□□ 0.44
HPS4-216ENST00000493455 GIMAP8Q8ND71 665 aaPredicted RBP17.78■□□□□ 0.44
HPS4-216ENST00000493455 FAM20AQ96MK3 541 aa17.78■□□□□ 0.44
HPS4-216ENST00000493455 DEFB118Q96PH6 123 aa17.78■□□□□ 0.44
HPS4-216ENST00000493455 GDPD2Q9HCC8 539 aa17.78■□□□□ 0.44
HPS4-216ENST00000493455 TBC1D22BQ9NU19 505 aa17.78■□□□□ 0.44
HPS4-216ENST00000493455 POLR3EQ9NVU0 708 aa17.78■□□□□ 0.44
HPS4-216ENST00000493455 CFAP45Q9UL16 551 aa17.78■□□□□ 0.44
HPS4-216ENST00000493455 GNEQ9Y223 722 aaKnown RBP17.78■□□□□ 0.44
HPS4-216ENST00000493455 SYNRGQ9UMZ2 1314 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 VWA3AA6NCI4 1184 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 POTEMA6NI47 508 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 TBX3O15119 743 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 DUSP11O75319 330 aaKnown RBP17.77■□□□□ 0.44
HPS4-216ENST00000493455 BMP15O95972 392 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 PTPAQ15257 358 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 COL13A1Q5TAT6 717 aaPredicted RBP17.77■□□□□ 0.44
HPS4-216ENST00000493455 METTL7BQ6UX53 244 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 AFG1LQ8WV93 481 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 ARMC5Q96C12 935 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 SPATA32Q96LK8 384 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 MTMR9Q96QG7 549 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 SENP7Q9BQF6 1050 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 UNC45AQ9H3U1 944 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 SPC25Q9HBM1 224 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 PCDHA12Q9UN75 941 aa17.77■□□□□ 0.44
HPS4-216ENST00000493455 WDR81Q562E7 1941 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 NFASCO94856 1347 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 MYADML2A6NDP7 307 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 SPTLC2O15270 562 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 DHX15O43143 795 aaKnown RBP17.76■□□□□ 0.43
HPS4-216ENST00000493455 PSMD10O75832 226 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 NASPP49321 788 aaPredicted RBP17.76■□□□□ 0.43
HPS4-216ENST00000493455 CHMP4BP1P59074 171 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 LAMC2Q13753 1193 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 HSDL1Q3SXM5 330 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 UTP14CQ5TAP6 766 aaKnown RBP17.76■□□□□ 0.43
HPS4-216ENST00000493455 DTHD1Q6ZMT9 781 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 MIER3Q7Z3K6 550 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 LINC00301Q8NCQ3 95 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 RIT2Q99578 217 aa17.76■□□□□ 0.43
HPS4-216ENST00000493455 ELP1O95163 1332 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 LAD1O00515 517 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 MSCO60682 206 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 YEATS4O95619 227 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 CCNE2O96020 404 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 MYL3P08590 195 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 ACTR2P61160 394 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 KRT76Q01546 638 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 SLC39A14Q15043 492 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 ATL3Q6DD88 541 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 VAV3Q9UKW4 847 aa17.75■□□□□ 0.43
HPS4-216ENST00000493455 MYH9P35579 1960 aaKnown RBP17.75■□□□□ 0.43
HPS4-216ENST00000493455 HTTP42858 3142 aa17.74■□□□□ 0.43
HPS4-216ENST00000493455 BACH1O14867 736 aa17.74■□□□□ 0.43
HPS4-216ENST00000493455 TCF7P36402 384 aaPredicted RBP17.74■□□□□ 0.43
HPS4-216ENST00000493455 ME1P48163 572 aa17.74■□□□□ 0.43
HPS4-216ENST00000493455 GRIN1Q05586 938 aa17.74■□□□□ 0.43
HPS4-216ENST00000493455 ZRSR1Q15695 479 aaKnown RBP17.74■□□□□ 0.43
HPS4-216ENST00000493455 IL17AQ16552 155 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms