RNA–Protein interactions for RNA: ENST00000491718.5

TNRC6A-207, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 7,956 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-207ENST00000491718 PPP2R3CQ969Q6 453 aa7.08□□□□□ -1.28
TNRC6A-207ENST00000491718 TMEM109Q9BVC6 243 aa7.08□□□□□ -1.28
TNRC6A-207ENST00000491718 CLASP2O75122 1294 aaKnown RBP7.08□□□□□ -1.28
TNRC6A-207ENST00000491718 NCAPHQ15003 741 aa7.08□□□□□ -1.28
TNRC6A-207ENST00000491718 ZNF827Q17R98 1081 aa7.08□□□□□ -1.28
TNRC6A-207ENST00000491718 TEDDM1Q5T9Z0 273 aa7.08□□□□□ -1.28
TNRC6A-207ENST00000491718 CDKAL1Q5VV42 579 aa7.08□□□□□ -1.28
TNRC6A-207ENST00000491718 GRAMD4Q6IC98 578 aa7.08□□□□□ -1.28
TNRC6A-207ENST00000491718 AMFRQ9UKV5 643 aa7.08□□□□□ -1.28
TNRC6A-207ENST00000491718 FMNL1O95466 1100 aaPredicted RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 NQO1P15559 274 aaKnown RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 POLR2EP19388 210 aaKnown RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 ATP6V1C1P21283 382 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 COPS2P61201 443 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 ZBTB16Q05516 673 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 UBE4AQ14139 1066 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 KRT25Q7Z3Z0 450 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 SPDYE1Q8NFV5 336 aaPredicted RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 C17orf50Q8WW18 174 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 PRPF31Q8WWY3 499 aaKnown RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 MMS19Q96T76 1030 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 SAR1AQ9NR31 198 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 TMED5Q9Y3A6 229 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 GLI2P10070 1586 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 KRT4P19013 534 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 CHRNA3P32297 505 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 PSMC4P43686 418 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 GJC2Q5T442 439 aaPredicted RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 MTHFD1LQ6UB35 978 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 MPRIPQ6WCQ1 1025 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 COPS6Q7L5N1 327 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 SAMSN1Q9NSI8 373 aaKnown RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 CCDC87Q9NVE4 849 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 STK17AQ9UEE5 414 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 CIAO1O76071 339 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 MRPS9P82933 396 aaKnown RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 ERGIC2Q96RQ1 377 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 MTRQ99707 1265 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 GORASP1Q9BQQ3 440 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 KCNK9Q9NPC2 374 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 PHF8Q9UPP1 1060 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 PPIP5K2O43314 1243 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 GNA11P29992 359 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 HOXC9P31274 260 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 KCTD16Q68DU8 428 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 SMCR8Q8TEV9 937 aaPredicted RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 CCDC134Q9H6E4 229 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 SHPRHQ149N8 1683 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 ORC4O43929 436 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 RANBP6O60518 1105 aaKnown RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 GUCY2FP51841 1108 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 ZC3H6P61129 1189 aaKnown RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 KRT31Q15323 416 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 UBE3CQ15386 1083 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 PRR23CQ6ZRP0 262 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 FRA10AC1Q70Z53 315 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 SGMS1Q86VZ5 419 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 FTOQ9C0B1 505 aaKnown RBP eCLIP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 MRPL44Q9H9J2 332 aaKnown RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 AMOTL2Q9Y2J4 779 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 VCAM1P19320 739 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 GOLGA8FQ08AF8 430 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 GOLGA8DPQ0D2H9 430 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 TMTC3Q6ZXV5 915 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 RHOT2Q8IXI1 618 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 SNRNP27Q8WVK2 155 aaKnown RBP7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 JADE3Q92613 823 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 KIFAP3Q92845 792 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 PLAAQ9Y263 795 aa7.07□□□□□ -1.28
TNRC6A-207ENST00000491718 PJA2O43164 708 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 TBCAO75347 108 aaKnown RBP7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 PEX26Q7Z412 305 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 MB21D1Q8N884 522 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 PLBD2Q8NHP8 589 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 RNF217Q8TC41 542 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 ZBTB9Q96C00 473 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 YIPF3Q9GZM5 350 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 EPB41L5Q9HCM4 733 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 SORCS3Q9UPU3 1222 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 QRICH2Q9H0J4 1663 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 RNMTO43148 476 aaKnown RBP7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 PARP1P09874 1014 aaKnown RBP7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 AMPD2Q01433 879 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 APOA5Q6Q788 366 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 TMEM237Q96Q45 408 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 PNKPQ96T60 521 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 EPC1Q9H2F5 836 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 TMBIM4Q9HC24 238 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 SLC24A3Q9HC58 644 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 TBC1D23Q9NUY8 699 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 JCADQ9P266 1359 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 MLH3Q9UHC1 1453 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 I3L4J1 428 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 ENC1O14682 589 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 SERPING1P05155 500 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 H2AFZP0C0S5 128 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 MARK3P27448 753 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 AP2B1P63010 937 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 TCP11X2Q5H9J9 407 aa7.06□□□□□ -1.28
TNRC6A-207ENST00000491718 KRT39Q6A163 491 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms