RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TCRBV5S4A2TA0A5A2 114 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.55□□□□□ -1.52
CD46-216ENST00000490278 HRKO00198 91 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 TRAF5O00463 557 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 AMY2AP04746 511 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 AMY2BP19961 511 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 MECP2P51608 486 aaKnown RBP5.55□□□□□ -1.52
CD46-216ENST00000490278 JAM2P57087 298 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 YBX1P67809 324 aaKnown RBP5.55□□□□□ -1.52
CD46-216ENST00000490278 PRR5P85299 388 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 SEPT7Q16181 437 aaKnown RBP5.55□□□□□ -1.52
CD46-216ENST00000490278 ARHGAP44Q17R89 818 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 PLEKHN1Q494U1 663 aaPredicted RBP5.55□□□□□ -1.52
CD46-216ENST00000490278 OLFML2BQ68BL8 750 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 ZC3H14Q6PJT7 736 aaKnown RBP5.55□□□□□ -1.52
CD46-216ENST00000490278 EP400NLQ6ZTU2 488 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 MILR1Q7Z6M3 343 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 CHST14Q8NCH0 376 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 PHOSPHO1Q8TCT1 267 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 TSPAN17Q96FV3 270 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 LIN37Q96GY3 246 aaPredicted RBP5.55□□□□□ -1.52
CD46-216ENST00000490278 BRINP2Q9C0B6 783 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 ZNF552Q9H707 407 aaPredicted RBP5.55□□□□□ -1.52
CD46-216ENST00000490278 SMURF1Q9HCE7 757 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 MYOTQ9UBF9 498 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 PCDHB4Q9Y5E5 795 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 COL4A3BPQ9Y5P4 624 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 CARMIL2Q6F5E8 1435 aa5.55□□□□□ -1.52
CD46-216ENST00000490278 SLC27A2O14975 620 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 TAL1P17542 331 aaPredicted RBP5.54□□□□□ -1.52
CD46-216ENST00000490278 IBSPP21815 317 aaPredicted RBP5.54□□□□□ -1.52
CD46-216ENST00000490278 SCNN1BP51168 640 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 DHCR24Q15392 516 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 HHIPL2Q6UWX4 724 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 OTOP1Q7RTM1 612 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 PTRH1Q86Y79 214 aaKnown RBP5.54□□□□□ -1.52
CD46-216ENST00000490278 TRIM48Q8IWZ4 208 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 NLGN4XQ8N0W4 816 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 OR2W6PQ8NHA6 318 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 SH3RF2Q8TEC5 729 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 GPATCH3Q96I76 525 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 KRTAP4-2Q9BYR5 136 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.54□□□□□ -1.52
CD46-216ENST00000490278 PCDH12Q9NPG4 1184 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 FAM53CQ9NYF3 392 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 ASH2LQ9UBL3 628 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 B4GALT6Q9UBX8 382 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 SRPK3Q9UPE1 567 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 ZKSCAN5Q9Y2L8 839 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 HCFC2Q9Y5Z7 792 aa5.54□□□□□ -1.52
CD46-216ENST00000490278 TCRBV5S2A0A599 114 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 SLC12A8A0AV02 714 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 PTPDC1A2A3K4 754 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 MAN2B1O00754 1011 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 GAS7O60861 476 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 F2P00734 622 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 NFKB2Q00653 900 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 AMPD3Q01432 767 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 SART3Q15020 963 aaKnown RBP5.53□□□□□ -1.52
CD46-216ENST00000490278 FIGNQ5HY92 759 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 KCTD1Q719H9 257 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 TMC6Q7Z403 805 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 ZNF605Q86T29 641 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 NXPE1Q8N323 547 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 AFAP1L2Q8N4X5 818 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 BOCQ9BWV1 1114 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 CD244Q9BZW8 370 aa5.53□□□□□ -1.52
CD46-216ENST00000490278 ZNF891A8MT65 544 aaPredicted RBP5.52□□□□□ -1.53
CD46-216ENST00000490278 KCNK3O14649 394 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 CPEP16870 476 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 VIPR1P32241 457 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 EPHA5P54756 1037 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 DSG1Q02413 1049 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 STRN3Q13033 797 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 TUSC3Q13454 348 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 SKOR2Q2VWA4 1001 aaPredicted RBP5.52□□□□□ -1.53
CD46-216ENST00000490278 PRR23BQ6ZRT6 265 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.52□□□□□ -1.53
CD46-216ENST00000490278 STRA8Q7Z7C7 330 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 RBM12BQ8IXT5 1001 aaKnown RBP5.52□□□□□ -1.53
CD46-216ENST00000490278 ARRDC4Q8NCT1 418 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 DIRC2Q96SL1 478 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 PDGFDQ9GZP0 370 aaPredicted RBP5.52□□□□□ -1.53
CD46-216ENST00000490278 EPB41L4BQ9H329 900 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 NSUN3Q9H649 340 aaKnown RBP5.52□□□□□ -1.53
CD46-216ENST00000490278 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.52□□□□□ -1.53
CD46-216ENST00000490278 NOP58Q9Y2X3 529 aaKnown RBP5.52□□□□□ -1.53
CD46-216ENST00000490278 ATP23Q9Y6H3 246 aa5.52□□□□□ -1.53
CD46-216ENST00000490278 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
CD46-216ENST00000490278 hCG_2014768A0A024R1R8 64 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 CLASP2O75122 1294 aaKnown RBP5.51□□□□□ -1.53
CD46-216ENST00000490278 HIP1RO75146 1068 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 LTFP02788 710 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 POU3F3P20264 500 aaPredicted RBP5.51□□□□□ -1.53
CD46-216ENST00000490278 SRSF3P84103 164 aaKnown RBP5.51□□□□□ -1.53
CD46-216ENST00000490278 ZNF200P98182 395 aaPredicted RBP5.51□□□□□ -1.53
CD46-216ENST00000490278 IRF9Q00978 393 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 MLANAQ16655 118 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 NOSTRINQ8IVI9 506 aa5.51□□□□□ -1.53
CD46-216ENST00000490278 CLEC4DQ8WXI8 215 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms