RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 CIITAP33076 1130 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 PRPHP41219 470 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 UBA7P41226 1012 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 NEDD9Q14511 834 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 TTLL4Q14679 1199 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 SLC39A14Q15043 492 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 MORN1Q5T089 497 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 LRCH2Q5VUJ6 765 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 KRT79Q5XKE5 535 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 OLFML2BQ68BL8 750 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 HAUS3Q68CZ6 603 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 CCDC73Q6ZRK6 1079 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 ARMCX2Q7L311 632 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 EEPD1Q7L9B9 569 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 C7orf61Q8IZ16 206 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 FAM133AQ8N9E0 248 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 LINC00301Q8NCQ3 95 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 SCFD2Q8WU76 684 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 ATXN2LQ8WWM7 1075 aaKnown RBP7.84□□□□□ -1.15
UBR4-214ENST00000486515 CALML4Q96GE6 196 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 MAML3Q96JK9 1138 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 TRIM47Q96LD4 638 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 CCDC43Q96MW1 224 aaKnown RBP7.84□□□□□ -1.15
UBR4-214ENST00000486515 ASB2Q96Q27 587 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 PYM1Q9BRP8 204 aaKnown RBP7.84□□□□□ -1.15
UBR4-214ENST00000486515 TINF2Q9BSI4 451 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 SEMA6BQ9H3T3 888 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 SPC25Q9HBM1 224 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 VTA1Q9NP79 307 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.84□□□□□ -1.15
UBR4-214ENST00000486515 COL20A1Q9P218 1284 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 CCDC39Q9UFE4 941 aa7.84□□□□□ -1.15
UBR4-214ENST00000486515 COL11A1P12107 1806 aaPredicted RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 CYP3A7-CYP3A51PA0A087WV96 503 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 SOWAHBA6NEL2 793 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 FAM205CA6NFA0 338 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 IPO5O00410 1097 aaKnown RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 MEIS1O00470 390 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 CUTAO60888 179 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 COBLO75128 1261 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 PRPF40AO75400 957 aaKnown RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 HOXC6P09630 235 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 TXNP10599 105 aaKnown RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 CYP3A7P24462 503 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 LONP1P36776 959 aaKnown RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 TECP42680 631 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 NASPP49321 788 aaPredicted RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 FLT3LGP49771 235 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 ATP2C1P98194 919 aaPredicted RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 PRKCZQ05513 592 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 NBR1Q14596 966 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 EARS2Q5JPH6 523 aaKnown RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 POTEEQ6S8J3 1075 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 DHX37Q8IY37 1157 aaKnown RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 USP38Q8NB14 1042 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 LEO1Q8WVC0 666 aaPredicted RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 AK8Q96MA6 479 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 PURBQ96QR8 312 aaKnown RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 RIT2Q99578 217 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 TTC12Q9H892 705 aaPredicted RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 KCNH7Q9NS40 1196 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 LRWD1Q9UFC0 647 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 SRRDQ9UH36 339 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 NRBP1Q9UHY1 535 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 HOOK1Q9UJC3 728 aaKnown RBP7.83□□□□□ -1.16
UBR4-214ENST00000486515 RCOR1Q9UKL0 485 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 FAM184BQ9ULE4 1060 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 UBIAD1Q9Y5Z9 338 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 CDH23Q9H251 3354 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 CACNA1BQ00975 2339 aa7.83□□□□□ -1.16
UBR4-214ENST00000486515 ELP1O95163 1332 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 FRMPD4Q14CM0 1322 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 A0A0G2JMZ2 1700 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 NKRFO15226 690 aaKnown RBP eCLIP7.82□□□□□ -1.16
UBR4-214ENST00000486515 ADCY3O60266 1144 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 MBD3O95983 291 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 SYN1P17600 705 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 EDNRBP24530 442 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 SFNP31947 248 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 TOB1P50616 345 aaPredicted RBP7.82□□□□□ -1.16
UBR4-214ENST00000486515 UBE2HP62256 183 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 KRT76Q01546 638 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 IRF5Q13568 498 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 ACVR2BQ13705 512 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 PDIA5Q14554 519 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 ZRSR1Q15695 479 aaKnown RBP7.82□□□□□ -1.16
UBR4-214ENST00000486515 SKOR2Q2VWA4 1001 aaPredicted RBP7.82□□□□□ -1.16
UBR4-214ENST00000486515 ADALQ6DHV7 355 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 IQSEC1Q6DN90 963 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 NCAPH2Q6IBW4 605 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 MAMDC4Q6UXC1 1216 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 CLEC17AQ6ZS10 378 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 MIER3Q7Z3K6 550 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 POTEDQ86YR6 584 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 SLAIN1Q8ND83 568 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 SYAP1Q96A49 352 aaPredicted RBP7.82□□□□□ -1.16
UBR4-214ENST00000486515 INPP4AQ96PE3 977 aaPredicted RBP7.82□□□□□ -1.16
UBR4-214ENST00000486515 SENP7Q9BQF6 1050 aa7.82□□□□□ -1.16
UBR4-214ENST00000486515 NT5C3AQ9H0P0 336 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms