RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 U2AF1L4Q8WU68 220 aaKnown RBP14.38□□□□□ -0.11
HDAC7-223ENST00000485796 AFG1LQ8WV93 481 aa14.38□□□□□ -0.11
HDAC7-223ENST00000485796 MTMR9Q96QG7 549 aa14.38□□□□□ -0.11
HDAC7-223ENST00000485796 ZNF577Q9BSK1 485 aa14.38□□□□□ -0.11
HDAC7-223ENST00000485796 UPF3AQ9H1J1 476 aaKnown RBP14.38□□□□□ -0.11
HDAC7-223ENST00000485796 XPNPEP3Q9NQH7 507 aa14.38□□□□□ -0.11
HDAC7-223ENST00000485796 IPO5O00410 1097 aaKnown RBP14.37□□□□□ -0.11
HDAC7-223ENST00000485796 SGPL1O95470 568 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 GH1P01241 217 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
HDAC7-223ENST00000485796 TGFB3P10600 412 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 TRAPPC10P48553 1259 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 GJA9P57773 515 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 CEBPZQ03701 1054 aaKnown RBP14.37□□□□□ -0.11
HDAC7-223ENST00000485796 LRRC41Q15345 812 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 IL17AQ16552 155 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 HSDL1Q3SXM5 330 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 RILPL1Q5EBL4 403 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 DHX37Q8IY37 1157 aaKnown RBP14.37□□□□□ -0.11
HDAC7-223ENST00000485796 TNS4Q8IZW8 715 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 KLHDC9Q8NEP7 349 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 USP28Q96RU2 1077 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 SENP7Q9BQF6 1050 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 CRISPLD2Q9H0B8 497 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 TFIP11Q9UBB9 837 aaKnown RBP14.37□□□□□ -0.11
HDAC7-223ENST00000485796 DOCK5Q9H7D0 1870 aa14.37□□□□□ -0.11
HDAC7-223ENST00000485796 GSTTP1A0A1W2PQM5 241 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 MAFGO15525 162 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 NEMFO60524 1076 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 PSMD10O75832 226 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 C6orf222P0C671 652 aaPredicted RBP14.36□□□□□ -0.11
HDAC7-223ENST00000485796 GCFC2P16383 781 aaKnown RBP14.36□□□□□ -0.11
HDAC7-223ENST00000485796 EN2P19622 333 aaPredicted RBP14.36□□□□□ -0.11
HDAC7-223ENST00000485796 SETQ01105 290 aaPredicted RBP14.36□□□□□ -0.11
HDAC7-223ENST00000485796 PTGDRQ13258 359 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 NEDD9Q14511 834 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 CCSAPQ6IQ19 270 aaPredicted RBP14.36□□□□□ -0.11
HDAC7-223ENST00000485796 KCNV1Q6PIU1 500 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 METTL7BQ6UX53 244 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 PPP1R13LQ8WUF5 828 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 CDHR1Q96JP9 859 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 SPATA33Q96N06 139 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 NAP1L4Q99733 375 aaKnown RBP14.36□□□□□ -0.11
HDAC7-223ENST00000485796 AP5M1Q9H0R1 490 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 UNC45AQ9H3U1 944 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 MLXIPQ9HAP2 919 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 VAV3Q9UKW4 847 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 OGDHLQ9ULD0 1010 aa14.36□□□□□ -0.11
HDAC7-223ENST00000485796 EML1O00423 815 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 NKRFO15226 690 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC7-223ENST00000485796 TFRCP02786 760 aaKnown RBP14.35□□□□□ -0.11
HDAC7-223ENST00000485796 TXKP42681 527 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 GJA8P48165 433 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 DNM1Q05193 864 aaKnown RBP14.35□□□□□ -0.11
HDAC7-223ENST00000485796 LAMC2Q13753 1193 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 PTPAQ15257 358 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 SF3A1Q15459 793 aaKnown RBP14.35□□□□□ -0.11
HDAC7-223ENST00000485796 CALCRLQ16602 461 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 FSCN1Q16658 493 aaKnown RBP14.35□□□□□ -0.11
HDAC7-223ENST00000485796 LRCH2Q5VUJ6 765 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 B3GNT9Q6UX72 402 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 DIS3LQ8TF46 1054 aaKnown RBP14.35□□□□□ -0.11
HDAC7-223ENST00000485796 EMID1Q96A84 441 aaPredicted RBP14.35□□□□□ -0.11
HDAC7-223ENST00000485796 ZNF396Q96N95 335 aaPredicted RBP14.35□□□□□ -0.11
HDAC7-223ENST00000485796 GPR20Q99678 358 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 TMEM106CQ9BVX2 250 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 JPH1Q9HDC5 661 aaPredicted RBP14.35□□□□□ -0.11
HDAC7-223ENST00000485796 Q9Y3F1 56 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 NFASCO94856 1347 aa14.35□□□□□ -0.11
HDAC7-223ENST00000485796 A6NJR5 290 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 CCDC85CA6NKD9 419 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 CHMP2AO43633 222 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 MSCO60682 206 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 GAS7O60861 476 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 MMP3P08254 477 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 SOX10P56693 466 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 ACTR2P61160 394 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 NKX3-2P78367 333 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 GRIN1Q05586 938 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 SPIRE1Q08AE8 756 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 KCNA10Q16322 511 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 GNASQ5JWF2 1037 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 FAM20AQ96MK3 541 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 PCYT2Q99447 389 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 SDF4Q9BRK5 362 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 SLC9A2Q9UBY0 812 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 ATP6V1DQ9Y5K8 247 aa14.34□□□□□ -0.11
HDAC7-223ENST00000485796 MARCH6O60337 910 aa14.33□□□□□ -0.12
HDAC7-223ENST00000485796 MYL3P08590 195 aa14.33□□□□□ -0.12
HDAC7-223ENST00000485796 OR52Z1P0C646 297 aa14.33□□□□□ -0.12
HDAC7-223ENST00000485796 ZNF286BP0CG31 522 aa14.33□□□□□ -0.12
HDAC7-223ENST00000485796 ATP2C1P98194 919 aaPredicted RBP14.33□□□□□ -0.12
HDAC7-223ENST00000485796 UTP14CQ5TAP6 766 aaKnown RBP14.33□□□□□ -0.12
HDAC7-223ENST00000485796 CXCL17Q6UXB2 119 aa14.33□□□□□ -0.12
HDAC7-223ENST00000485796 TRIM50Q86XT4 487 aa14.33□□□□□ -0.12
HDAC7-223ENST00000485796 PPTC7Q8NI37 304 aa14.33□□□□□ -0.12
HDAC7-223ENST00000485796 KAT2BQ92831 832 aa14.33□□□□□ -0.12
HDAC7-223ENST00000485796 FERMT2Q96AC1 680 aa14.33□□□□□ -0.12
HDAC7-223ENST00000485796 RIT2Q99578 217 aa14.33□□□□□ -0.12
HDAC7-223ENST00000485796 TEKT3Q9BXF9 490 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 160.6 ms