RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 MYL3P08590 195 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 ARP10275 920 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 CYP3A7P24462 503 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 PURAQ00577 322 aaKnown RBP12.3□□□□□ -0.44
ATG4B-219ENST00000479941 GUCY1B3Q02153 619 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 SNX17Q15036 470 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 HSDL1Q3SXM5 330 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 Q4G0T1 1027 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 PRR16Q569H4 304 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 CXCL17Q6UXB2 119 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 SLC39A5Q6ZMH5 540 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 NEK8Q86SG6 692 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 HSCBQ8IWL3 235 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 VTI1AQ96AJ9 217 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 MTG1Q9BT17 334 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-219ENST00000479941 FOXP1Q9H334 677 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-219ENST00000479941 AGO4Q9HCK5 861 aaKnown RBP12.3□□□□□ -0.44
ATG4B-219ENST00000479941 NFASCO94856 1347 aa12.3□□□□□ -0.44
ATG4B-219ENST00000479941 MYH7BA7E2Y1 1941 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 CEP290O15078 2479 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 A0A0U1RQG5 324 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-219ENST00000479941 SORBS3O60504 671 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 HOXD8P13378 290 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-219ENST00000479941 GCFC2P16383 781 aaKnown RBP12.29□□□□□ -0.44
ATG4B-219ENST00000479941 ATN1P54259 1190 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-219ENST00000479941 GNL2Q13823 731 aaKnown RBP12.29□□□□□ -0.44
ATG4B-219ENST00000479941 LETM2Q2VYF4 491 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 PPP4R3AQ6IN85 833 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 DPF3Q92784 378 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 LENG9Q96B70 501 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 MBOAT7Q96N66 472 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 GPR20Q99678 358 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 SDF4Q9BRK5 362 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 ZNF577Q9BSK1 485 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 BCAS3Q9H6U6 928 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 JPH1Q9HDC5 661 aaPredicted RBP12.29□□□□□ -0.44
ATG4B-219ENST00000479941 TBC1D22BQ9NU19 505 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 PKD2L1Q9P0L9 805 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 SLC9A2Q9UBY0 812 aa12.29□□□□□ -0.44
ATG4B-219ENST00000479941 ARVCFO00192 962 aa12.28□□□□□ -0.44
ATG4B-219ENST00000479941 IPO5O00410 1097 aaKnown RBP12.28□□□□□ -0.44
ATG4B-219ENST00000479941 EVI5O60447 810 aa12.28□□□□□ -0.44
ATG4B-219ENST00000479941 PDCP20941 246 aa12.28□□□□□ -0.44
ATG4B-219ENST00000479941 ITGB3BPQ13352 177 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-219ENST00000479941 ITGA7Q13683 1181 aa12.28□□□□□ -0.44
ATG4B-219ENST00000479941 LRRC26Q2I0M4 334 aa12.28□□□□□ -0.44
ATG4B-219ENST00000479941 EARS2Q5JPH6 523 aaKnown RBP12.28□□□□□ -0.44
ATG4B-219ENST00000479941 LARP1BQ659C4 914 aaKnown RBP12.28□□□□□ -0.44
ATG4B-219ENST00000479941 SEPT1Q8WYJ6 367 aa12.28□□□□□ -0.44
ATG4B-219ENST00000479941 KATNAL1Q9BW62 490 aa12.28□□□□□ -0.44
ATG4B-219ENST00000479941 MROH7Q68CQ1 1323 aa12.28□□□□□ -0.44
ATG4B-219ENST00000479941 H3BQV1 296 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 MSH4O15457 936 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 DHX15O43143 795 aaKnown RBP12.27□□□□□ -0.45
ATG4B-219ENST00000479941 CCNT1O60563 726 aaKnown RBP12.27□□□□□ -0.45
ATG4B-219ENST00000479941 TDP2O95551 362 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 F2P00734 622 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 U2AF2P26368 475 aaKnown RBP eCLIP12.27□□□□□ -0.45
ATG4B-219ENST00000479941 CDK7P50613 346 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 RTP1P59025 263 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 SP4Q02446 784 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 NOSTRINQ8IVI9 506 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 SLC43A3Q8NBI5 491 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 TOX2Q96NM4 488 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 RIT2Q99578 217 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 DDX25Q9UHL0 483 aaKnown RBP12.27□□□□□ -0.45
ATG4B-219ENST00000479941 TCEAL9Q9UHQ7 104 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 ATP11BQ9Y2G3 1177 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 NR2E3Q9Y5X4 410 aa12.27□□□□□ -0.45
ATG4B-219ENST00000479941 GSTTP1A0A1W2PQM5 241 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 FAM205CA6NFA0 338 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 LGALS2P05162 132 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 TCF7P36402 384 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-219ENST00000479941 TRAPPC10P48553 1259 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 PSMC6P62333 389 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 PTPN11Q06124 597 aaPredicted RBP12.26□□□□□ -0.45
ATG4B-219ENST00000479941 TRIM60Q495X7 471 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 NFRKBQ6P4R8 1299 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 ANKRD33Q7Z3H0 272 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 KAT2BQ92831 832 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 SLC5A5Q92911 643 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 C16orf70Q9BSU1 422 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 GRIN2DO15399 1336 aa12.26□□□□□ -0.45
ATG4B-219ENST00000479941 DCDC2CA8MYV0 355 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 KIF28PB7ZC32 967 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 H3BRB1 525 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 HAS3O00219 553 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 TBX3O15119 743 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 TLR3O15455 904 aaKnown RBP12.25□□□□□ -0.45
ATG4B-219ENST00000479941 SLC37A4O43826 429 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 PQBP1O60828 265 aaKnown RBP12.25□□□□□ -0.45
ATG4B-219ENST00000479941 ATG7O95352 703 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 HSP90AA1P07900 732 aaKnown RBP12.25□□□□□ -0.45
ATG4B-219ENST00000479941 ZNF286BP0CG31 522 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 PSEN2P49810 448 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 ACTR2P61160 394 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 KRT76Q01546 638 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 TLE2Q04725 743 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 ORC2Q13416 577 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-219ENST00000479941 MFSD10Q14728 455 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms