RNA–Protein interactions for RNA: ENST00000479239.1

LRRC47-203, Transcript of leucine rich repeat containing 47, humanhuman

TSL 3

Gene LRRC47, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-203ENST00000479239 SLFN12Q8IYM2 578 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 SAMD3Q8N6K7 520 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 CLEC4DQ8WXI8 215 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 PAGE5Q96GU1 130 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 CLMNQ96JQ2 1002 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 MBOAT7Q96N66 472 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 TRERF1Q96PN7 1200 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 RAB34Q9BZG1 259 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 CCSER1Q9C0I3 900 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 NAT10Q9H0A0 1025 aaKnown RBP6.9□□□□□ -1.3
LRRC47-203ENST00000479239 ZNF408Q9H9D4 720 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 SCUBE2Q9NQ36 999 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 HOMER2Q9NSB8 354 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 LRWD1Q9UFC0 647 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 TUBE1Q9UJT0 475 aa6.9□□□□□ -1.3
LRRC47-203ENST00000479239 PAPPA2Q9BXP8 1791 aa6.9□□□□□ -1.31
LRRC47-203ENST00000479239 A0A087WWV3 80 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 POM121CA8CG34 1229 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 NFIBO00712 420 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 TBX3O15119 743 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 CIITAP33076 1130 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 ZNF165P49910 485 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 HSD17B4P51659 736 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 PPIL2Q13356 520 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 KARSQ15046 597 aaKnown RBP6.89□□□□□ -1.31
LRRC47-203ENST00000479239 PKN2Q16513 984 aaKnown RBP6.89□□□□□ -1.31
LRRC47-203ENST00000479239 TKFCQ3LXA3 575 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 Q4G0T1 1027 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 MUM1L1Q5H9M0 696 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 LDLRAD1Q5T700 205 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 KRT79Q5XKE5 535 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 ISM2Q6H9L7 571 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 PDXDC2PQ6P474 469 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 GRAMD1CQ8IYS0 662 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 IGSF22Q8N9C0 903 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 CRYGNQ8WXF5 182 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 HAS1Q92839 578 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 SMARCE1Q969G3 411 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 SLC10A4Q96EP9 437 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 CALML4Q96GE6 196 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 WNK4Q96J92 1243 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 CALR3Q96L12 384 aaKnown RBP6.89□□□□□ -1.31
LRRC47-203ENST00000479239 UIMC1Q96RL1 719 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 PLIN2Q99541 437 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 TRAIPQ9BWF2 469 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 TTC12Q9H892 705 aaPredicted RBP6.89□□□□□ -1.31
LRRC47-203ENST00000479239 CBX8Q9HC52 389 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 DISC1Q9NRI5 854 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 RNF146Q9NTX7 359 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 MAP3K20Q9NYL2 800 aaKnown RBP6.89□□□□□ -1.31
LRRC47-203ENST00000479239 PCDHA12Q9UN75 941 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 ADAMTS5Q9UNA0 930 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 PCDHA5Q9Y5H7 936 aa6.89□□□□□ -1.31
LRRC47-203ENST00000479239 MYPNQ86TC9 1320 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 A0A0G2JLL6 359 aaPredicted RBP6.88□□□□□ -1.31
LRRC47-203ENST00000479239 UNCXA6NJT0 531 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 FAM86B1E9PN63 330 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 GOLGA6L19H0YKK7 550 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 ATP2A1O14983 1001 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 HOXA2O43364 376 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 FAM86B2P0C5J1 330 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 PLCG1P19174 1290 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 STAT3P40763 770 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 GCGRP47871 477 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 USP46P62068 366 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 UBXN2AP68543 259 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 IRX3P78415 501 aaPredicted RBP6.88□□□□□ -1.31
LRRC47-203ENST00000479239 GHRHRQ02643 423 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 PLS1Q14651 629 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 TMEM132BQ14DG7 1078 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 DPCR1Q3MIW9 517 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 TREML2Q5T2D2 321 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 NT5DC1Q5TFE4 455 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 SNRNP48Q6IEG0 339 aaKnown RBP6.88□□□□□ -1.31
LRRC47-203ENST00000479239 NSMFQ6X4W1 530 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 RNF207Q6ZRF8 634 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 C11orf57Q6ZUT1 292 aaPredicted RBP6.88□□□□□ -1.31
LRRC47-203ENST00000479239 FASTKD5Q7L8L6 764 aaKnown RBP6.88□□□□□ -1.31
LRRC47-203ENST00000479239 SH3RF1Q7Z6J0 888 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 PRRT2Q7Z6L0 340 aaPredicted RBP6.88□□□□□ -1.31
LRRC47-203ENST00000479239 LUZP1Q86V48 1076 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 REPS2Q8NFH8 660 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 CYP2W1Q8TAV3 490 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 SYTL5Q8TDW5 730 aaPredicted RBP6.88□□□□□ -1.31
LRRC47-203ENST00000479239 SNX29Q8TEQ0 813 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 STAMQ92783 540 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 GJA10Q969M2 543 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 OPTNQ96CV9 577 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 CDK5RAP3Q96JB5 506 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 FAM20AQ96MK3 541 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 KCNK17Q96T54 332 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 TEX13BQ9BXU2 312 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 CUEDC2Q9H467 287 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 KCNMB3Q9NPA1 279 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 MAN1B1Q9UKM7 699 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 KCNH4Q9UQ05 1017 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 RABGAP1Q9Y3P9 1069 aa6.88□□□□□ -1.31
LRRC47-203ENST00000479239 KIAA0100Q14667 2235 aaKnown RBP6.88□□□□□ -1.31
LRRC47-203ENST00000479239 IGLV3-22A0A075B6J6 115 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms