RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	JMJD7	P0C870	316 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	VIPR1	P32241	457 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	SLC6A11	P48066	632 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	YBX1	P67809	324 aa	Known RBP	6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	SPIRE1	Q08AE8	756 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	TMEM62	Q0P6H9	643 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	TM4SF20	Q53R12	229 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	ZNF385B	Q569K4	471 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	C16orf59	Q7L2K0	433 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	TMC6	Q7Z403	805 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	MILR1	Q7Z6M3	343 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	TARS2	Q9BW92	718 aa	Known RBP	6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	INTS7	Q9NVH2	962 aa	Known RBP	6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	SAMD15	Q9P1V8	674 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	PALD1	Q9ULE6	856 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	KCTD3	Q9Y597	815 aa		6.12	□□□□□ -1.43
RBM39-231	ENST00000477334	ABLIM1	O14639	778 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	HGS	O14964	777 aa	Predicted RBP	6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	GSTA4	O15217	222 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	MYCLP1	P12525	358 aa	Predicted RBP	6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	PDE6A	P16499	860 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	KRT15	P19012	456 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	SSPN	Q14714	243 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	CHRNA2	Q15822	529 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	CRY1	Q16526	586 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	PIK3R6	Q5UE93	754 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	OLFML2B	Q68BL8	750 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	ZCCHC8	Q6NZY4	707 aa	Known RBP	6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	OSTM1	Q86WC4	334 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	RBM12B	Q8IXT5	1001 aa	Known RBP	6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	KRTAP9-8	Q9BYQ0	159 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	SLC6A20	Q9NP91	592 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	SIRT5	Q9NXA8	310 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	PLA2G2D	Q9UNK4	145 aa		6.11	□□□□□ -1.43
RBM39-231	ENST00000477334	TCRBV5S4A2T	A0A5A2	114 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334		B4E1Z4	1266 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	SLC27A2	O14975	620 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	KPNA6	O60684	536 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	GLRX3	O76003	335 aa	Known RBP	6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	FLT3	P36888	993 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	NEK4	P51957	841 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	ZNF200	P98182	395 aa	Predicted RBP	6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	CFAP100	Q494V2	611 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	EMC4	Q5J8M3	183 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	TCERG1L	Q5VWI1	586 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	ARHGAP36	Q6ZRI8	547 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	DDX53	Q86TM3	631 aa	Known RBP	6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	TSPAN17	Q96FV3	270 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	SIGLEC10	Q96LC7	697 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	CELF4	Q9BZC1	486 aa	Known RBP	6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	MYOT	Q9UBF9	498 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	DSE	Q9UL01	958 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	PCDHB4	Q9Y5E5	795 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334	IRAK3	Q9Y616	596 aa		6.1	□□□□□ -1.43
RBM39-231	ENST00000477334		A0A087X0B3	334 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	FAM83G	A6ND36	823 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334		M0R2C6	588 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	KCNK3	O14649	394 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	PDE8A	O60658	829 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	MAFK	O60675	156 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	TADA3	O75528	432 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	ZBTB7A	O95365	584 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	EPHB3	P54753	998 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	JAM2	P57087	298 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	SLC9A5	Q14940	896 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	TMEM177	Q53S58	311 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	HABP4	Q5JVS0	413 aa	Known RBP	6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	CDCA2	Q69YH5	1023 aa	Predicted RBP	6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	UBE2R2	Q712K3	238 aa	Predicted RBP	6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	OVCH1	Q7RTY7	1134 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	TMEM151B	Q8IW70	566 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	ARRDC4	Q8NCT1	418 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	UHMK1	Q8TAS1	419 aa	Known RBP	6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	SH3RF2	Q8TEC5	729 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	DDX1	Q92499	740 aa	Known RBP	6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	ALG3	Q92685	438 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	WNK4	Q96J92	1243 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	CD244	Q9BZW8	370 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	SMOC1	Q9H4F8	434 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	CNTD2	Q9H8S5	307 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	ZNF652	Q9Y2D9	606 aa		6.09	□□□□□ -1.43
RBM39-231	ENST00000477334	TCRBV5S2	A0A599	114 aa		6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	N4BP3	O15049	544 aa		6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	LTF	P02788	710 aa		6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	AMY2A	P04746	511 aa		6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	PI3	P19957	117 aa		6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	AMY2B	P19961	511 aa		6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	MASP1	P48740	699 aa		6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	NCKAP1L	P55160	1127 aa		6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	PCBP1	Q15365	356 aa	Known RBP eCLIP	6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	GPR19	Q15760	415 aa		6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	PTRH1	Q86Y79	214 aa	Known RBP	6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	PANK1	Q8TE04	598 aa		6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	ASH2L	Q9UBL3	628 aa		6.08	□□□□□ -1.44
RBM39-231	ENST00000477334	GSG1L2	A8MUP6	293 aa		6.07	□□□□□ -1.44
RBM39-231	ENST00000477334	NPTXR	O95502	500 aa		6.07	□□□□□ -1.44
RBM39-231	ENST00000477334	HOXA5	P20719	270 aa		6.07	□□□□□ -1.44
RBM39-231	ENST00000477334	PML	P29590	882 aa		6.07	□□□□□ -1.44
RBM39-231	ENST00000477334	CDR1	P51861	262 aa		6.07	□□□□□ -1.44
RBM39-231	ENST00000477334	CTSW	P56202	376 aa		6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 37 ms