RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 HSPBP1Q9NZL4 362 aa7.53□□□□□ -1.2
CD46-213ENST00000471987 PABPC1P11940 636 aaKnown RBP7.52□□□□□ -1.21
CD46-213ENST00000471987 IL13P35225 146 aa7.52□□□□□ -1.21
CD46-213ENST00000471987 KIZQ2M2Z5 673 aa7.52□□□□□ -1.21
CD46-213ENST00000471987 ZXDCQ2QGD7 858 aaPredicted RBP7.52□□□□□ -1.21
CD46-213ENST00000471987 NSMFQ6X4W1 530 aa7.52□□□□□ -1.21
CD46-213ENST00000471987 GGNQ86UU5 652 aa7.52□□□□□ -1.21
CD46-213ENST00000471987 LRRC47Q8N1G4 583 aaKnown RBP7.52□□□□□ -1.21
CD46-213ENST00000471987 TTLL11Q8NHH1 800 aa7.52□□□□□ -1.21
CD46-213ENST00000471987 TRIM55Q9BYV6 548 aa7.52□□□□□ -1.21
CD46-213ENST00000471987 NUB1Q9Y5A7 615 aa7.52□□□□□ -1.21
CD46-213ENST00000471987 GRK2P25098 689 aa7.51□□□□□ -1.21
CD46-213ENST00000471987 GRK3P35626 688 aa7.51□□□□□ -1.21
CD46-213ENST00000471987 SURF1Q15526 300 aa7.51□□□□□ -1.21
CD46-213ENST00000471987 LBX2Q6XYB7 198 aa7.51□□□□□ -1.21
CD46-213ENST00000471987 OTOP3Q7RTS5 596 aa7.51□□□□□ -1.21
CD46-213ENST00000471987 PLEKHH3Q7Z736 793 aa7.51□□□□□ -1.21
CD46-213ENST00000471987 ZNF669Q96BR6 464 aaPredicted RBP7.51□□□□□ -1.21
CD46-213ENST00000471987 YTHDC1Q96MU7 727 aaKnown RBP7.51□□□□□ -1.21
CD46-213ENST00000471987 GPR20Q99678 358 aa7.51□□□□□ -1.21
CD46-213ENST00000471987 TMEM168Q9H0V1 697 aa7.51□□□□□ -1.21
CD46-213ENST00000471987 PPARGC1AQ9UBK2 798 aaKnown RBP7.51□□□□□ -1.21
CD46-213ENST00000471987 CROTQ9UKG9 612 aa7.51□□□□□ -1.21
CD46-213ENST00000471987 ZNF536O15090 1300 aa7.51□□□□□ -1.21
CD46-213ENST00000471987 TRAV20A0A0B4J274 112 aa7.5□□□□□ -1.21
CD46-213ENST00000471987 SLC27A2O14975 620 aa7.5□□□□□ -1.21
CD46-213ENST00000471987 MLLT6P55198 1093 aaPredicted RBP7.5□□□□□ -1.21
CD46-213ENST00000471987 GPR85P60893 370 aa7.5□□□□□ -1.21
CD46-213ENST00000471987 SPIRE1Q08AE8 756 aa7.5□□□□□ -1.21
CD46-213ENST00000471987 TMC5Q6UXY8 1006 aa7.5□□□□□ -1.21
CD46-213ENST00000471987 DPH6Q7L8W6 267 aa7.5□□□□□ -1.21
CD46-213ENST00000471987 TTC9BQ8N6N2 239 aa7.5□□□□□ -1.21
CD46-213ENST00000471987 OSBP2Q969R2 916 aa7.5□□□□□ -1.21
CD46-213ENST00000471987 SAMD11Q96NU1 681 aa7.5□□□□□ -1.21
CD46-213ENST00000471987 IGSF5Q9NSI5 407 aa7.5□□□□□ -1.21
CD46-213ENST00000471987 GNAT1P11488 350 aa7.49□□□□□ -1.21
CD46-213ENST00000471987 IFRD2Q12894 506 aaPredicted RBP7.49□□□□□ -1.21
CD46-213ENST00000471987 NTRK3Q16288 839 aa7.49□□□□□ -1.21
CD46-213ENST00000471987 STYK1Q6J9G0 422 aa7.49□□□□□ -1.21
CD46-213ENST00000471987 KCNT2Q6UVM3 1135 aa7.49□□□□□ -1.21
CD46-213ENST00000471987 IFNL3Q8IZI9 196 aa7.49□□□□□ -1.21
CD46-213ENST00000471987 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.49□□□□□ -1.21
CD46-213ENST00000471987 LOXL4Q96JB6 756 aa7.49□□□□□ -1.21
CD46-213ENST00000471987 FTSJ1Q9UET6 329 aa7.49□□□□□ -1.21
CD46-213ENST00000471987 WASF3Q9UPY6 502 aa7.49□□□□□ -1.21
CD46-213ENST00000471987 MYRFQ9Y2G1 1151 aa7.49□□□□□ -1.21
CD46-213ENST00000471987 LAMTOR5O43504 91 aa7.48□□□□□ -1.21
CD46-213ENST00000471987 B4GALT3O60512 393 aa7.48□□□□□ -1.21
CD46-213ENST00000471987 STK10O94804 968 aaKnown RBP7.48□□□□□ -1.21
CD46-213ENST00000471987 ADAM17P78536 824 aa7.48□□□□□ -1.21
CD46-213ENST00000471987 VASNQ6EMK4 673 aa7.48□□□□□ -1.21
CD46-213ENST00000471987 GLB1LQ6UWU2 654 aa7.48□□□□□ -1.21
CD46-213ENST00000471987 CKAP2LQ8IYA6 745 aa7.48□□□□□ -1.21
CD46-213ENST00000471987 UHMK1Q8TAS1 419 aaKnown RBP7.48□□□□□ -1.21
CD46-213ENST00000471987 CLEC4DQ8WXI8 215 aa7.48□□□□□ -1.21
CD46-213ENST00000471987 ZCCHC14Q8WYQ9 949 aaKnown RBP7.48□□□□□ -1.21
CD46-213ENST00000471987 KCNJ15Q99712 375 aa7.48□□□□□ -1.21
CD46-213ENST00000471987 U2SURPO15042 1029 aaKnown RBP7.47□□□□□ -1.21
CD46-213ENST00000471987 INSRRP14616 1297 aa7.47□□□□□ -1.21
CD46-213ENST00000471987 GRIN1Q05586 938 aa7.47□□□□□ -1.21
CD46-213ENST00000471987 TUSC3Q13454 348 aa7.47□□□□□ -1.21
CD46-213ENST00000471987 TRMT10BQ6PF06 316 aaKnown RBP7.47□□□□□ -1.21
CD46-213ENST00000471987 KLHL36Q8N4N3 616 aa7.47□□□□□ -1.21
CD46-213ENST00000471987 MBD6Q96DN6 1003 aa7.47□□□□□ -1.21
CD46-213ENST00000471987 PDGFDQ9GZP0 370 aaPredicted RBP7.47□□□□□ -1.21
CD46-213ENST00000471987 DLL4Q9NR61 685 aa7.47□□□□□ -1.21
CD46-213ENST00000471987 FAM47E-STBD1D6RA91 191 aa7.46□□□□□ -1.22
CD46-213ENST00000471987 E9PSI1 815 aa7.46□□□□□ -1.22
CD46-213ENST00000471987 SOD2P04179 222 aa7.46□□□□□ -1.22
CD46-213ENST00000471987 COL6A2P12110 1019 aa7.46□□□□□ -1.22
CD46-213ENST00000471987 ZC3H6P61129 1189 aaKnown RBP7.46□□□□□ -1.22
CD46-213ENST00000471987 YOD1Q5VVQ6 348 aaPredicted RBP7.46□□□□□ -1.22
CD46-213ENST00000471987 CPZQ66K79 652 aa7.46□□□□□ -1.22
CD46-213ENST00000471987 PKN3Q6P5Z2 889 aa7.46□□□□□ -1.22
CD46-213ENST00000471987 PROSER1Q86XN7 944 aa7.46□□□□□ -1.22
CD46-213ENST00000471987 DTX3Q8N9I9 347 aa7.46□□□□□ -1.22
CD46-213ENST00000471987 ALG1Q9BT22 464 aa7.46□□□□□ -1.22
CD46-213ENST00000471987 SSBP3Q9BWW4 388 aaPredicted RBP7.46□□□□□ -1.22
CD46-213ENST00000471987 BARX1Q9HBU1 254 aaPredicted RBP7.46□□□□□ -1.22
CD46-213ENST00000471987 RBPJLQ9UBG7 517 aa7.46□□□□□ -1.22
CD46-213ENST00000471987 DSEQ9UL01 958 aa7.46□□□□□ -1.22
CD46-213ENST00000471987 BLACEA4D250 179 aa7.45□□□□□ -1.22
CD46-213ENST00000471987 FAHP16930 419 aa7.45□□□□□ -1.22
CD46-213ENST00000471987 PAN2Q504Q3 1202 aaKnown RBP7.45□□□□□ -1.22
CD46-213ENST00000471987 HABP4Q5JVS0 413 aaKnown RBP7.45□□□□□ -1.22
CD46-213ENST00000471987 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.45□□□□□ -1.22
CD46-213ENST00000471987 RBM12BQ8IXT5 1001 aaKnown RBP7.45□□□□□ -1.22
CD46-213ENST00000471987 KBTBD2Q8IY47 623 aa7.45□□□□□ -1.22
CD46-213ENST00000471987 CHST13Q8NET6 341 aa7.45□□□□□ -1.22
CD46-213ENST00000471987 C8orf49Q96NF6 230 aa7.45□□□□□ -1.22
CD46-213ENST00000471987 SPATA9Q9BWV2 254 aa7.45□□□□□ -1.22
CD46-213ENST00000471987 MSRB2Q9Y3D2 182 aa7.45□□□□□ -1.22
CD46-213ENST00000471987 NKRFO15226 690 aaKnown RBP eCLIP7.44□□□□□ -1.22
CD46-213ENST00000471987 PDPK1O15530 556 aa7.44□□□□□ -1.22
CD46-213ENST00000471987 CHGBP05060 677 aa7.44□□□□□ -1.22
CD46-213ENST00000471987 NFATC3Q12968 1075 aa7.44□□□□□ -1.22
CD46-213ENST00000471987 PUM1Q14671 1186 aaKnown RBP eCLIP7.44□□□□□ -1.22
CD46-213ENST00000471987 LIMS2Q7Z4I7 341 aa7.44□□□□□ -1.22
CD46-213ENST00000471987 C1QTNF3Q9BXJ4 246 aa7.44□□□□□ -1.22
CD46-213ENST00000471987 FBXO21O94952 628 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms