RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 SUPT20HQ8NEM7 779 aa22.59■■□□□ 1.21
TUBGCP3-204ENST00000464139 MYO6Q9UM54 1294 aa22.59■■□□□ 1.21
TUBGCP3-204ENST00000464139 SMCR8Q8TEV9 937 aaPredicted RBP22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 PLAGL2Q9UPG8 496 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 COL4A3BPQ9Y5P4 624 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 SPDYE2BA6NHP3 402 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 ZNF263O14978 683 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 IPO7O95373 1038 aaKnown RBP22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 FOSP01100 380 aaPredicted RBP22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 SPDYE6P0CI01 402 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 MMP14P50281 582 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 PABPC4Q13310 644 aaKnown RBP eCLIP22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 CCDC40Q4G0X9 1142 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 HAUS3Q68CZ6 603 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 CCDC84Q86UT8 332 aaPredicted RBP22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 SCFD1Q8WVM8 642 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 CCDC42Q96M95 316 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 PDGFDQ9GZP0 370 aaPredicted RBP22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 TMOD2Q9NZR1 351 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 ARHGAP20Q9P2F6 1191 aa22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.58■■□□□ 1.21
TUBGCP3-204ENST00000464139 PSMD14O00487 310 aa22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 MSH4O15457 936 aa22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 SPATA31C1P0DKV0 1188 aa22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 HOXA7P31268 230 aaPredicted RBP22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 EN1Q05925 392 aaPredicted RBP22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 RRAGAQ7L523 313 aa22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 ZMYND15Q9H091 742 aa22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 ANKZF1Q9H8Y5 726 aa22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 KRT86O43790 486 aa22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 CDK17Q00537 523 aa22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 WHAMMP3Q1A5X7 153 aa22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 TBC1D5Q92609 795 aa22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 EMILIN3Q9NT22 766 aa22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 ZBTB12Q9Y330 459 aaPredicted RBP22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 TNS1Q9HBL0 1735 aaKnown RBP22.57■■□□□ 1.2
TUBGCP3-204ENST00000464139 LRRC53A6NM62 1247 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 TBX3O15119 743 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 ATP1A1P05023 1023 aaKnown RBP22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 STAT2P52630 851 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 CYP4A11Q02928 519 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 FAM83BQ5T0W9 1011 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 MCTP2Q6DN12 878 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 RSBN1LQ6PCB5 846 aaPredicted RBP22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 HERC5Q9UII4 1024 aaKnown RBP22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 HNRNPH3P31942 346 aaKnown RBP22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 ZNF76P36508 570 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 PLA2G4AP47712 749 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 KCNMA1Q12791 1236 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 SLC30A10Q6XR72 485 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 CDAN1Q8IWY9 1227 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 ERMNQ8TAM6 284 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 IQCDQ96DY2 449 aa22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 ZNF70Q9UC06 446 aaPredicted RBP22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 RGS17Q9UGC6 210 aaPredicted RBP22.56■■□□□ 1.2
TUBGCP3-204ENST00000464139 CTAGE15A4D2H0 777 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 CTAGE8P0CG41 777 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 FOXR2Q6PJQ5 311 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 ZNF662Q6ZS27 426 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 CTAGE6Q86UF2 777 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 CTAGE4Q8IX94 777 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 KCTD10Q9H3F6 313 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 ARHGEF10LQ9HCE6 1279 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 POLD4Q9HCU8 107 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 DNM3Q9UQ16 869 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 MACROD2A1Z1Q3 448 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 SASH3O75995 380 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 TBC1D8O95759 1140 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 RHOXF2BP0C7M4 288 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 RPA1P27694 616 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 EIF4A3P38919 411 aaKnown RBP22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 CASP5P51878 434 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 DLGAP5Q15398 846 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 CCDC174Q6PII3 467 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 SAMD1Q6SPF0 538 aaPredicted RBP22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 TRAPPC11Q7Z392 1133 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 NEK11Q8NG66 645 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 BAP1Q92560 729 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 PNKPQ96T60 521 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 RHOXF2Q9BQY4 288 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 ZNF277Q9NRM2 450 aaPredicted RBP22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 STK32BQ9NY57 414 aa22.55■■□□□ 1.2
TUBGCP3-204ENST00000464139 SLC26A4O43511 780 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 SRGAP2O75044 1071 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 CFBP00751 764 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 CIITAP33076 1130 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 GIT2Q14161 759 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 SPA17Q15506 151 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 ZYXQ15942 572 aaKnown RBP22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 FAM20AQ96MK3 541 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 VEZTQ9HBM0 779 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 ARFGAP3Q9NP61 516 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 FRMD3A2A2Y4 597 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 VAV2P52735 878 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 DMTNQ08495 405 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 POTEAQ6S8J7 498 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 VAV3Q9UKW4 847 aa22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 COL2A1P02458 1487 aaPredicted RBP22.54■■□□□ 1.2
TUBGCP3-204ENST00000464139 CACNA2D4Q7Z3S7 1137 aa22.53■■□□□ 1.2
TUBGCP3-204ENST00000464139 LARGE2Q8N3Y3 721 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms