RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 RETREG2Q8NC44 543 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 AFAP1L1Q8TED9 768 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 CDHR1Q96JP9 859 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 PGBD1Q96JS3 809 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 CTAGE1Q96RT6 745 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 C16orf70Q9BSU1 422 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 ANO3Q9BYT9 981 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 TTYH1Q9H313 450 aaPredicted RBP11.66□□□□□ -0.54
SF3A3-204ENST00000462258 BCAS3Q9H6U6 928 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 RIC8AQ9NPQ8 531 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 BARHL2Q9NY43 387 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 CXXC1Q9P0U4 656 aaPredicted RBP11.66□□□□□ -0.54
SF3A3-204ENST00000462258 STXBP5LQ9Y2K9 1186 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
SF3A3-204ENST00000462258 TET1Q8NFU7 2136 aa11.66□□□□□ -0.54
SF3A3-204ENST00000462258 ZBBXA8MT70 800 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 IQCF3P0C7M6 154 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 SCG2P13521 617 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 KCNA2P16389 499 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 ITGB5P18084 799 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 RBL2Q08999 1139 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 AP3B2Q13367 1082 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 MTMR1Q13613 665 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 PFKFB3Q16875 520 aaPredicted RBP11.65□□□□□ -0.54
SF3A3-204ENST00000462258 RUFY3Q7L099 469 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 TRIM50Q86XT4 487 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 GIMAP8Q8ND71 665 aaPredicted RBP11.65□□□□□ -0.54
SF3A3-204ENST00000462258 DHX38Q92620 1227 aaKnown RBP11.65□□□□□ -0.54
SF3A3-204ENST00000462258 VWCEQ96DN2 955 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 GPR20Q99678 358 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 SENP7Q9BQF6 1050 aa11.65□□□□□ -0.54
SF3A3-204ENST00000462258 SIP14410 1827 aa11.65□□□□□ -0.55
SF3A3-204ENST00000462258 EYSQ5T1H1 3165 aa11.65□□□□□ -0.55
SF3A3-204ENST00000462258 KAT6AQ92794 2004 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 SMCO2A6NFE2 343 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 GRXCR1A8MXD5 290 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 H3BRB1 525 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 FOSP01100 380 aaPredicted RBP11.64□□□□□ -0.55
SF3A3-204ENST00000462258 ACTN1P12814 892 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 PBX2P40425 430 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 PTK7Q13308 1070 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 LRRC8DQ7L1W4 858 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 CCDC12Q8WUD4 166 aaPredicted RBP11.64□□□□□ -0.55
SF3A3-204ENST00000462258 TIFAQ96CG3 184 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 PBX4Q9BYU1 374 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 UPF3BQ9BZI7 483 aaKnown RBP11.64□□□□□ -0.55
SF3A3-204ENST00000462258 GLT8D2Q9H1C3 349 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 SEMA6BQ9H3T3 888 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
SF3A3-204ENST00000462258 ZSWIM6Q9HCJ5 1215 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 PKD2L1Q9P0L9 805 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 ZNF215Q9UL58 517 aaPredicted RBP11.64□□□□□ -0.55
SF3A3-204ENST00000462258 TELO2Q9Y4R8 837 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 UBIAD1Q9Y5Z9 338 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 CYP46A1Q9Y6A2 500 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 MICAL3Q7RTP6 2002 aa11.64□□□□□ -0.55
SF3A3-204ENST00000462258 ESYT2A0FGR8 921 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 C17orf102A2RUQ5 167 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 ATP9AO75110 1047 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 SMIM10L2AP0DMW4 78 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 SMIM10L2BP0DMW5 78 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 CKBP12277 381 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 SELPP16109 830 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 HOXC8P31273 242 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 CLK2P49760 499 aaKnown RBP11.63□□□□□ -0.55
SF3A3-204ENST00000462258 ZNF200P98182 395 aaPredicted RBP11.63□□□□□ -0.55
SF3A3-204ENST00000462258 AKAP17AQ02040 695 aaKnown RBP11.63□□□□□ -0.55
SF3A3-204ENST00000462258 TOB2Q14106 344 aaPredicted RBP11.63□□□□□ -0.55
SF3A3-204ENST00000462258 HIC1Q14526 733 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 RAB30Q15771 203 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 UTP14CQ5TAP6 766 aaKnown RBP11.63□□□□□ -0.55
SF3A3-204ENST00000462258 WNT8BQ93098 351 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 PHKBQ93100 1093 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 CDX2Q99626 313 aaPredicted RBP11.63□□□□□ -0.55
SF3A3-204ENST00000462258 RNF26Q9BY78 433 aaPredicted RBP11.63□□□□□ -0.55
SF3A3-204ENST00000462258 TM6SF1Q9BZW5 370 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 JADE2Q9NQC1 790 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 TMEM260Q9NX78 707 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 SLC4A7Q9Y6M7 1214 aa11.63□□□□□ -0.55
SF3A3-204ENST00000462258 CHD9Q3L8U1 2897 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 COL4A4P53420 1690 aaPredicted RBP11.62□□□□□ -0.55
SF3A3-204ENST00000462258 PRPF3O43395 683 aaKnown RBP11.62□□□□□ -0.55
SF3A3-204ENST00000462258 PPFIA3O75145 1194 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 IFNAR1P17181 557 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 PDIA3P30101 505 aaKnown RBP11.62□□□□□ -0.55
SF3A3-204ENST00000462258 TCF7P36402 384 aaPredicted RBP11.62□□□□□ -0.55
SF3A3-204ENST00000462258 SREBF1P36956 1147 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 EVCP57679 992 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 CCT2P78371 535 aaKnown RBP11.62□□□□□ -0.55
SF3A3-204ENST00000462258 NTRK3Q16288 839 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 PKN1Q16512 942 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 TRIM71Q2Q1W2 868 aaKnown RBP11.62□□□□□ -0.55
SF3A3-204ENST00000462258 JAKMIP3Q5VZ66 844 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 SERINC5Q86VE9 423 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 CCDC148Q8NFR7 591 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 MYLIPQ8WY64 445 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 ATP6V0A1Q93050 837 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 MXRA8Q9BRK3 442 aa11.62□□□□□ -0.55
SF3A3-204ENST00000462258 SLC26A6Q9BXS9 759 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms