RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 GRK4P32298 578 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 ADCYAP1R1P41586 468 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 ME1P48163 572 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 FXR2P51116 673 aaKnown RBP eCLIP16.52■□□□□ 0.244e-7■□□□□ 9.5
SHANK2-210ENST00000449116 SP2Q02086 613 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 TRIM32Q13049 653 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 NEDD9Q14511 834 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 IL17AQ16552 155 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 IQSEC1Q6DN90 963 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 CTU1Q7Z7A3 348 aaKnown RBP16.52■□□□□ 0.24
SHANK2-210ENST00000449116 TMEM87AQ8NBN3 555 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 PCDHA7Q9UN72 937 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 PCDHA12Q9UN75 941 aa16.52■□□□□ 0.24
SHANK2-210ENST00000449116 NKRFO15226 690 aaKnown RBP eCLIP16.51■□□□□ 0.238e-7■■■□□ 18.4
SHANK2-210ENST00000449116 PRKAR2AP13861 404 aaKnown RBP16.51■□□□□ 0.23
SHANK2-210ENST00000449116 TECP42680 631 aa16.51■□□□□ 0.23
SHANK2-210ENST00000449116 CACNB2Q08289 660 aaPredicted RBP16.51■□□□□ 0.23
SHANK2-210ENST00000449116 LY6KQ17RY6 165 aa16.51■□□□□ 0.23
SHANK2-210ENST00000449116 CCDC144BQ3MJ40 725 aa16.51■□□□□ 0.23
SHANK2-210ENST00000449116 DUSP28Q4G0W2 176 aa16.51■□□□□ 0.23
SHANK2-210ENST00000449116 RAB34Q9BZG1 259 aa16.51■□□□□ 0.23
SHANK2-210ENST00000449116 TCEAL9Q9UHQ7 104 aa16.51■□□□□ 0.23
SHANK2-210ENST00000449116 VAV3Q9UKW4 847 aa16.51■□□□□ 0.23
SHANK2-210ENST00000449116 FAM184BQ9ULE4 1060 aa16.51■□□□□ 0.23
SHANK2-210ENST00000449116 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.5■□□□□ 0.23
SHANK2-210ENST00000449116 GOLGA6L22H0YM25 854 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 DDX39AO00148 427 aaKnown RBP16.5■□□□□ 0.23
SHANK2-210ENST00000449116 CUTAO60888 179 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 GGPS1O95749 300 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 AKR1A1P14550 325 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 SMPD1P17405 629 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 LONP1P36776 959 aaKnown RBP16.5■□□□□ 0.23
SHANK2-210ENST00000449116 TNFAIP2Q03169 654 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 GRIN1Q05586 938 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 SPIRE1Q08AE8 756 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 PPP2R5CQ13362 524 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 PDIA5Q14554 519 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 MAP3K21Q5TCX8 1036 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 CYFIP1Q7L576 1253 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 IGSF22Q8N9C0 903 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 TRPV1Q8NER1 839 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 CLIC6Q96NY7 704 aa16.5■□□□□ 0.23
SHANK2-210ENST00000449116 JPH1Q9HDC5 661 aaPredicted RBP16.5■□□□□ 0.23
SHANK2-210ENST00000449116 FARP2O94887 1054 aaPredicted RBP16.49■□□□□ 0.23
SHANK2-210ENST00000449116 INHAP05111 366 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 KRT76Q01546 638 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 CELF3Q5SZQ8 465 aaKnown RBP16.49■□□□□ 0.23
SHANK2-210ENST00000449116 AXDND1Q5T1B0 1012 aaPredicted RBP16.49■□□□□ 0.23
SHANK2-210ENST00000449116 TMEM63BQ5T3F8 832 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 ADALQ6DHV7 355 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 ZNF746Q6NUN9 644 aaPredicted RBP16.49■□□□□ 0.23
SHANK2-210ENST00000449116 METTL7BQ6UX53 244 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 B3GNT9Q6UX72 402 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 ZNF579Q8NAF0 562 aaKnown RBP16.49■□□□□ 0.23
SHANK2-210ENST00000449116 COPS5Q92905 334 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 AK8Q96MA6 479 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 CSRNP2Q9H175 543 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 UNC45AQ9H3U1 944 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 MLXIPQ9HAP2 919 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 SLC9A2Q9UBY0 812 aa16.49■□□□□ 0.23
SHANK2-210ENST00000449116 POTEMA6NI47 508 aa16.48■□□□□ 0.23
SHANK2-210ENST00000449116 SEPT4O43236 478 aa16.48■□□□□ 0.23
SHANK2-210ENST00000449116 CHMP2AO43633 222 aa16.48■□□□□ 0.23
SHANK2-210ENST00000449116 SORBS3O60504 671 aa16.48■□□□□ 0.23
SHANK2-210ENST00000449116 PRPF40AO75400 957 aaKnown RBP16.48■□□□□ 0.23
SHANK2-210ENST00000449116 GH1P01241 217 aa16.48■□□□□ 0.23
SHANK2-210ENST00000449116 LAMC2Q13753 1193 aa16.48■□□□□ 0.23
SHANK2-210ENST00000449116 PKN2Q16513 984 aaKnown RBP16.48■□□□□ 0.23
SHANK2-210ENST00000449116 NCAPH2Q6IBW4 605 aa16.48■□□□□ 0.23
SHANK2-210ENST00000449116 DHX37Q8IY37 1157 aaKnown RBP16.48■□□□□ 0.23
SHANK2-210ENST00000449116 EMID1Q96A84 441 aaPredicted RBP16.48■□□□□ 0.23
SHANK2-210ENST00000449116 BCAS3Q9H6U6 928 aa16.48■□□□□ 0.23
SHANK2-210ENST00000449116 LRWD1Q9UFC0 647 aa16.48■□□□□ 0.23
SHANK2-210ENST00000449116 GNEQ9Y223 722 aaKnown RBP16.48■□□□□ 0.23
SHANK2-210ENST00000449116 GOLGA6L4A6NEF3 574 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 ADCY6O43306 1168 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 CCNE2O96020 404 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 CNGA1P29973 690 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 CCND3P30281 292 aaPredicted RBP16.47■□□□□ 0.23
SHANK2-210ENST00000449116 SFNP31947 248 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 JAK3P52333 1124 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 ARHGAP1Q07960 439 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 SLC9C1Q4G0N8 1177 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 FBXO46Q6PJ61 603 aaPredicted RBP16.47■□□□□ 0.23
SHANK2-210ENST00000449116 MIER3Q7Z3K6 550 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 SMAP1Q8IYB5 467 aaPredicted RBP16.47■□□□□ 0.23
SHANK2-210ENST00000449116 RDM1Q8NG50 284 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 SH3TC2Q8TF17 1288 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 PRDM10Q9NQV6 1147 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 Q9Y3F1 56 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 STK24Q9Y6E0 443 aa16.47■□□□□ 0.23
SHANK2-210ENST00000449116 A0A1W2PQ27 194 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 A0A1W2PQ64 194 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 A0A1W2PQD8 194 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 WDR64B1ANS9 1081 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 EML1O00423 815 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 ACTR2P61160 394 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 SP4Q02446 784 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 EPHA7Q15375 998 aa16.46■□□□□ 0.23
SHANK2-210ENST00000449116 SPECC1Q5M775 1068 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms