RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 H3BQ06 376 aaPredicted RBP6.55□□□□□ -1.36
SDCBP-205ENST00000447267 TIAF1O95411 115 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 IGHA2P01877 340 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 USP5P45974 858 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 GRIA4P48058 902 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 PKN1Q16512 942 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 ZNF423Q2M1K9 1284 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 BEND4Q6ZU67 534 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 TTC16Q8NEE8 873 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 UPF3BQ9BZI7 483 aaKnown RBP6.55□□□□□ -1.36
SDCBP-205ENST00000447267 A0A0G2JMZ2 1700 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 DNAH12Q6ZR08 3092 aa6.55□□□□□ -1.36
SDCBP-205ENST00000447267 H3BRB1 525 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 CXCL11O14625 94 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 LPXNO60711 386 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 TIMP1P01033 207 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 ANXA1P04083 346 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 CA3P07451 260 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 SLC5A1P13866 664 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 DRD2P14416 443 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 SPINK2P20155 84 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 EHHADHQ08426 723 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 FAAP100Q0VG06 881 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 PPIGQ13427 754 aaKnown RBP eCLIP6.54□□□□□ -1.36
SDCBP-205ENST00000447267 FAM110CQ1W6H9 321 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 OTOP2Q7RTS6 562 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 CLEC10AQ8IUN9 316 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 CCNJLQ8IV13 435 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 GALNT12Q8IXK2 581 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 TRPV1Q8NER1 839 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 DBNDD2Q9BQY9 259 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 USP26Q9BXU7 913 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 TUT1Q9H6E5 874 aaKnown RBP6.54□□□□□ -1.36
SDCBP-205ENST00000447267 FLRT1Q9NZU1 646 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 EGFL7Q9UHF1 273 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 MYO15AQ9UKN7 3530 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 CHD7Q9P2D1 2997 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 DOCK3Q8IZD9 2030 aa6.54□□□□□ -1.36
SDCBP-205ENST00000447267 MGAMO43451 1857 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 ZNF536O15090 1300 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 PSME4Q14997 1843 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 A0A0G2JLL6 359 aaPredicted RBP6.53□□□□□ -1.36
SDCBP-205ENST00000447267 XRCC5P13010 732 aaKnown RBP6.53□□□□□ -1.36
SDCBP-205ENST00000447267 ORC1Q13415 861 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 PROSER3Q2NL68 480 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 TREML2Q5T2D2 321 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 MFSD5Q6N075 450 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 FASTKD5Q7L8L6 764 aaKnown RBP6.53□□□□□ -1.36
SDCBP-205ENST00000447267 PRRT2Q7Z6L0 340 aaPredicted RBP6.53□□□□□ -1.36
SDCBP-205ENST00000447267 ADHFE1Q8IWW8 467 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 ARRDC4Q8NCT1 418 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 SMG8Q8ND04 991 aaKnown RBP6.53□□□□□ -1.36
SDCBP-205ENST00000447267 SHKBP1Q8TBC3 707 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 HNRNPABQ99729 332 aaKnown RBP6.53□□□□□ -1.36
SDCBP-205ENST00000447267 SOX17Q9H6I2 414 aaPredicted RBP6.53□□□□□ -1.36
SDCBP-205ENST00000447267 USTQ9Y2C2 406 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 PCDHA11Q9Y5I1 949 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 ZHX2Q9Y6X8 837 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 SPTBN2O15020 2390 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 NUP98P52948 1817 aa6.53□□□□□ -1.36
SDCBP-205ENST00000447267 A0A096LPE4 126 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 A0A1W2PPZ6 126 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 GSC2O15499 205 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 ECEL1O95672 775 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 PDGFBP01127 241 aaPredicted RBP6.52□□□□□ -1.37
SDCBP-205ENST00000447267 FGBP02675 491 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 ADRB1P08588 477 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 AIMP1Q12904 312 aaKnown RBP6.52□□□□□ -1.37
SDCBP-205ENST00000447267 CDPF1Q6NVV7 123 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 FDX2Q6P4F2 183 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 MCM10Q7L590 875 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 COPS6Q7L5N1 327 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 KCNG4Q8TDN1 519 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 USP6NLQ92738 828 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 SIN3AQ96ST3 1273 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 FAM129BQ96TA1 746 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 TRIM56Q9BRZ2 755 aaKnown RBP6.52□□□□□ -1.37
SDCBP-205ENST00000447267 ZNF341Q9BYN7 854 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 KCNF1Q9H3M0 494 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 SUGCTQ9HAC7 445 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 OAS3Q9Y6K5 1087 aaKnown RBP6.52□□□□□ -1.37
SDCBP-205ENST00000447267 MED23Q9ULK4 1368 aa6.52□□□□□ -1.37
SDCBP-205ENST00000447267 ZNF521Q96K83 1311 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 MYBBP1AQ9BQG0 1328 aaKnown RBP6.51□□□□□ -1.37
SDCBP-205ENST00000447267 IRS4O14654 1257 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-205ENST00000447267 SART1O43290 800 aaKnown RBP6.51□□□□□ -1.37
SDCBP-205ENST00000447267 COBLO75128 1261 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 MAP4P27816 1152 aaKnown RBP6.51□□□□□ -1.37
SDCBP-205ENST00000447267 CYP2C19P33261 490 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 TNNI2P48788 182 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 ARL4DP49703 201 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 CCT4P50991 539 aaKnown RBP6.51□□□□□ -1.37
SDCBP-205ENST00000447267 ATXN1P54253 815 aaKnown RBP6.51□□□□□ -1.37
SDCBP-205ENST00000447267 ZXDAP98168 799 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 GSTM4Q03013 218 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 TAP1Q03518 808 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 DMWDQ09019 674 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 DCTN1Q14203 1278 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 LRRC41Q15345 812 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 CCDC174Q6PII3 467 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms