RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 ATF7IPQ6VMQ6 1270 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 RUFY4Q6ZNE9 571 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 RASGRP4Q8TDF6 673 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 ZNF384Q8TF68 577 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 ACSF2Q96CM8 615 aaPredicted RBP8.87□□□□□ -0.99
SSXP3-201ENST00000442971 PURBQ96QR8 312 aaKnown RBP8.87□□□□□ -0.99
SSXP3-201ENST00000442971 PNNQ9H307 717 aaKnown RBP8.87□□□□□ -0.99
SSXP3-201ENST00000442971 CABP5Q9NP86 173 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 KLK13Q9UKR3 277 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 GREB1Q4ZG55 1949 aa8.87□□□□□ -0.99
SSXP3-201ENST00000442971 PYCARD-AS1I3L0S3 204 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 CERKLQ49MI3 558 aaPredicted RBP8.86□□□□□ -0.99
SSXP3-201ENST00000442971 CCDC30Q5VVM6 783 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 MAPKAPK5Q8IW41 473 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 ANKRD35Q8N283 1001 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 EFCAB3Q8N7B9 438 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 REPS2Q8NFH8 660 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 SH3RF3Q8TEJ3 882 aaPredicted RBP8.86□□□□□ -0.99
SSXP3-201ENST00000442971 LPIN2Q92539 896 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 RC3H2Q9HBD1 1191 aaKnown RBP8.86□□□□□ -0.99
SSXP3-201ENST00000442971 ARHGEF3Q9NR81 526 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 IGSF9Q9P2J2 1179 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 RIPK3Q9Y572 518 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 DOPEY2Q9Y3R5 2298 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 KIAA1671Q9BY89 1806 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 PTPRQQ9UMZ3 2332 aa8.86□□□□□ -0.99
SSXP3-201ENST00000442971 KPNA6O60684 536 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 WISP1O95388 367 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 HLA-DOAP06340 250 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 LDHCP07864 332 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 GUCY1A2P33402 732 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 DUSP28Q4G0W2 176 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.85□□□□□ -0.99
SSXP3-201ENST00000442971 SPICE1Q8N0Z3 855 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 LSM14AQ8ND56 463 aaKnown RBP8.85□□□□□ -0.99
SSXP3-201ENST00000442971 GPR152Q8TDT2 470 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 SEPT8Q92599 483 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 TEX13BQ9BXU2 312 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 BCAS3Q9H6U6 928 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 APC2O95996 2303 aa8.85□□□□□ -0.99
SSXP3-201ENST00000442971 ASB14A6NK59 587 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 SRFP11831 508 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 TMPOP42166 694 aaKnown RBP8.84□□□□□ -0.99
SSXP3-201ENST00000442971 CNTN2Q02246 1040 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 SIM2Q14190 667 aaPredicted RBP8.84□□□□□ -0.99
SSXP3-201ENST00000442971 SEPT2Q15019 361 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 TRIM71Q2Q1W2 868 aaKnown RBP8.84□□□□□ -0.99
SSXP3-201ENST00000442971 BRDTQ58F21 947 aaPredicted RBP8.84□□□□□ -0.99
SSXP3-201ENST00000442971 COLEC12Q5KU26 742 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 ATAT1Q5SQI0 421 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 SH3PXD2AQ5TCZ1 1133 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 KIAA1841Q6NSI8 718 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 DCLRE1AQ6PJP8 1040 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 KIAA1211Q6ZU35 1233 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 ERICH6Q7L0X2 663 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 EEPD1Q7L9B9 569 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 OTOP3Q7RTS5 596 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 SESTD1Q86VW0 696 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 FBXO16Q8IX29 292 aaPredicted RBP8.84□□□□□ -0.99
SSXP3-201ENST00000442971 WHAMMQ8TF30 809 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 TGFBRAP1Q8WUH2 860 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 CASP10Q92851 521 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 ZNF689Q96CS4 500 aaPredicted RBP8.84□□□□□ -0.99
SSXP3-201ENST00000442971 FBXO28Q9NVF7 368 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 MRPL42Q9Y6G3 142 aaKnown RBP8.84□□□□□ -0.99
SSXP3-201ENST00000442971 FLT1P17948 1338 aa8.84□□□□□ -0.99
SSXP3-201ENST00000442971 FAM221BA6H8Z2 402 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 CAPN8A6NHC0 703 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 CEACAM1P13688 526 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 SLC4A3P48751 1232 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 NRLP54845 237 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 STARD6P59095 220 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 ERVFC1P60507 584 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 GSTO1P78417 241 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 SCAPQ12770 1279 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 PTK7Q13308 1070 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 NONOQ15233 471 aaKnown RBP eCLIP8.83□□□□□ -1
SSXP3-201ENST00000442971 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.83□□□□□ -1
SSXP3-201ENST00000442971 DENND4AQ7Z401 1863 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 OR6J1Q8NGC5 347 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 SPIRE2Q8WWL2 714 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 WNT8BQ93098 351 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 CRELD1Q96HD1 420 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 CHMP4AQ9BY43 222 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 PRMT8Q9NR22 394 aaPredicted RBP8.83□□□□□ -1
SSXP3-201ENST00000442971 SAP30BPQ9UHR5 308 aaKnown RBP8.83□□□□□ -1
SSXP3-201ENST00000442971 BOLA1Q9Y3E2 137 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 URB1O60287 2271 aaKnown RBP8.83□□□□□ -1
SSXP3-201ENST00000442971 LAMA1P25391 3075 aa8.83□□□□□ -1
SSXP3-201ENST00000442971 RSPH10B2B2RC85 870 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 USP17L12C9JPN9 530 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 USP17L21D6R901 530 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 TREHO43280 583 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 LILRB3O75022 631 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 ZNF806P0C7X5 589 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 RSPH10BP0C881 870 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 PPP2R1AP30153 589 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 MAGEA9P43362 315 aa8.82□□□□□ -1
SSXP3-201ENST00000442971 PHKA1P46020 1223 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms