RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 SEPT14Q6ZU15 432 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 MSL3Q8N5Y2 521 aaKnown RBP25.88■■□□□ 1.73
CPSF4-204ENST00000436336 PDILTQ8N807 584 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 NPLOC4Q8TAT6 608 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 MMTAG2Q9BU76 263 aaKnown RBP25.88■■□□□ 1.73
CPSF4-204ENST00000436336 A0A087X0B3 334 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 SLC26A4O43511 780 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 PSMC4P43686 418 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 C1QTNF8P60827 252 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 ERMNQ8TAM6 284 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 SNX29Q8TEQ0 813 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 CALML4Q96GE6 196 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 PANK2Q9BZ23 570 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 NUP62CLQ9H1M0 184 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 CLSTN2Q9H4D0 955 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 GJD2Q9UKL4 321 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 CASP8AP2Q9UKL3 1982 aa25.88■■□□□ 1.73
CPSF4-204ENST00000436336 NFASCO94856 1347 aa25.87■■□□□ 1.73
CPSF4-204ENST00000436336 KCNA2P16389 499 aa25.87■■□□□ 1.73
CPSF4-204ENST00000436336 RGS2P41220 211 aa25.87■■□□□ 1.73
CPSF4-204ENST00000436336 KARSQ15046 597 aaKnown RBP25.87■■□□□ 1.73
CPSF4-204ENST00000436336 HAUS3Q68CZ6 603 aa25.87■■□□□ 1.73
CPSF4-204ENST00000436336 KCNV1Q6PIU1 500 aa25.87■■□□□ 1.73
CPSF4-204ENST00000436336 RASSF8Q8NHQ8 419 aa25.87■■□□□ 1.73
CPSF4-204ENST00000436336 SDF4Q9BRK5 362 aa25.87■■□□□ 1.73
CPSF4-204ENST00000436336 DISC1Q9NRI5 854 aa25.87■■□□□ 1.73
CPSF4-204ENST00000436336 SAGE1Q9NXZ1 904 aa25.87■■□□□ 1.73
CPSF4-204ENST00000436336 USP25Q9UHP3 1055 aa25.87■■□□□ 1.73
CPSF4-204ENST00000436336 TGFB3P10600 412 aa25.86■■□□□ 1.73
CPSF4-204ENST00000436336 KIF22Q14807 665 aa25.86■■□□□ 1.73
CPSF4-204ENST00000436336 EEPD1Q7L9B9 569 aa25.86■■□□□ 1.73
CPSF4-204ENST00000436336 IQUBQ8NA54 791 aa25.86■■□□□ 1.73
CPSF4-204ENST00000436336 SENP7Q9BQF6 1050 aa25.86■■□□□ 1.73
CPSF4-204ENST00000436336 UNC45AQ9H3U1 944 aa25.86■■□□□ 1.73
CPSF4-204ENST00000436336 SYNGAP1Q96PV0 1343 aa25.86■■□□□ 1.73
CPSF4-204ENST00000436336 LONRF3Q496Y0 759 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 KRBA2Q6ZNG9 492 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 DHX58Q96C10 678 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 TINF2Q9BSI4 451 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 ANP32EQ9BTT0 268 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 VTA1Q9NP79 307 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.85■■□□□ 1.73
CPSF4-204ENST00000436336 TCEAL9Q9UHQ7 104 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 KDM3AQ9Y4C1 1321 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 DDX39AO00148 427 aaKnown RBP25.85■■□□□ 1.73
CPSF4-204ENST00000436336 E2F4Q16254 413 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 RRAGBQ5VZM2 374 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 FBXO16Q8IX29 292 aaPredicted RBP25.85■■□□□ 1.73
CPSF4-204ENST00000436336 CNNM3Q8NE01 707 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 TRIM47Q96LD4 638 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 APBA2Q99767 749 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 ARHGAP39Q9C0H5 1083 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 SERTAD1Q9UHV2 236 aa25.85■■□□□ 1.73
CPSF4-204ENST00000436336 LOXHD1Q8IVV2 1947 aa25.84■■□□□ 1.73
CPSF4-204ENST00000436336 EML1O00423 815 aa25.84■■□□□ 1.73
CPSF4-204ENST00000436336 CHMP2AO43633 222 aa25.84■■□□□ 1.73
CPSF4-204ENST00000436336 CCT6AP40227 531 aaKnown RBP25.84■■□□□ 1.73
CPSF4-204ENST00000436336 KRT76Q01546 638 aa25.84■■□□□ 1.73
CPSF4-204ENST00000436336 HYIQ5T013 277 aa25.84■■□□□ 1.73
CPSF4-204ENST00000436336 GIMAP8Q8ND71 665 aaPredicted RBP25.84■■□□□ 1.73
CPSF4-204ENST00000436336 CDK5RAP3Q96JB5 506 aa25.84■■□□□ 1.73
CPSF4-204ENST00000436336 TNMDQ9H2S6 317 aa25.84■■□□□ 1.73
CPSF4-204ENST00000436336 CTAGE5O15320 804 aa25.83■■□□□ 1.73
CPSF4-204ENST00000436336 ACTN4O43707 911 aaKnown RBP25.83■■□□□ 1.73
CPSF4-204ENST00000436336 CYP2B6P20813 491 aa25.83■■□□□ 1.73
CPSF4-204ENST00000436336 STAT6P42226 847 aa25.83■■□□□ 1.73
CPSF4-204ENST00000436336 ZRSR1Q15695 479 aaKnown RBP25.83■■□□□ 1.73
CPSF4-204ENST00000436336 ELOA2Q8IYF1 753 aaPredicted RBP25.83■■□□□ 1.73
CPSF4-204ENST00000436336 NT5C3AQ9H0P0 336 aa25.83■■□□□ 1.73
CPSF4-204ENST00000436336 SNAI1O95863 264 aaPredicted RBP25.83■■□□□ 1.72
CPSF4-204ENST00000436336 SLFN14P0C7P3 912 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 RPA1P27694 616 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 SP2Q02086 613 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 GRB10Q13322 594 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 NEDD9Q14511 834 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 EPHA7Q15375 998 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 CAMK4Q16566 473 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 ZNF746Q6NUN9 644 aaPredicted RBP25.83■■□□□ 1.72
CPSF4-204ENST00000436336 KANK3Q6NY19 840 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 MIER3Q7Z3K6 550 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 CEP57L1Q8IYX8 460 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 CCDC34Q96HJ3 373 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 PNMA5Q96PV4 448 aa25.83■■□□□ 1.72
CPSF4-204ENST00000436336 EIF2AK1Q9BQI3 630 aaKnown RBP25.83■■□□□ 1.72
CPSF4-204ENST00000436336 POLR3CQ9BUI4 534 aaPredicted RBP25.83■■□□□ 1.72
CPSF4-204ENST00000436336 GZF1Q9H116 711 aaPredicted RBP25.83■■□□□ 1.72
CPSF4-204ENST00000436336 GPR25O00155 361 aa25.82■■□□□ 1.72
CPSF4-204ENST00000436336 LETM1O95202 739 aaPredicted RBP25.82■■□□□ 1.72
CPSF4-204ENST00000436336 PLCG1P19174 1290 aa25.82■■□□□ 1.72
CPSF4-204ENST00000436336 SFNP31947 248 aa25.82■■□□□ 1.72
CPSF4-204ENST00000436336 OLFML2BQ68BL8 750 aa25.82■■□□□ 1.72
CPSF4-204ENST00000436336 SCFD2Q8WU76 684 aa25.82■■□□□ 1.72
CPSF4-204ENST00000436336 KATNBL1Q9H079 304 aa25.82■■□□□ 1.72
CPSF4-204ENST00000436336 ABHD16BQ9H3Z7 469 aa25.82■■□□□ 1.72
CPSF4-204ENST00000436336 CUEDC2Q9H467 287 aa25.82■■□□□ 1.72
CPSF4-204ENST00000436336 JPH1Q9HDC5 661 aaPredicted RBP25.82■■□□□ 1.72
CPSF4-204ENST00000436336 DDX41Q9UJV9 622 aaKnown RBP25.82■■□□□ 1.72
CPSF4-204ENST00000436336 MED24O75448 989 aa25.81■■□□□ 1.72
CPSF4-204ENST00000436336 UBA1P22314 1058 aaKnown RBP25.81■■□□□ 1.72
CPSF4-204ENST00000436336 JAK3P52333 1124 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms