RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 NPEPPSL1A6NEC2 478 aa7.31□□□□□ -1.24
LINC00458-202ENST00000427299 LCP1P13796 627 aa7.31□□□□□ -1.24
LINC00458-202ENST00000427299 LTBRP36941 435 aa7.31□□□□□ -1.24
LINC00458-202ENST00000427299 DENND5AQ6IQ26 1287 aa7.31□□□□□ -1.24
LINC00458-202ENST00000427299 C6orf15Q6UXA7 325 aaPredicted RBP7.31□□□□□ -1.24
LINC00458-202ENST00000427299 CIR1Q86X95 450 aaPredicted RBP7.31□□□□□ -1.24
LINC00458-202ENST00000427299 CCDC140Q96MF4 163 aa7.31□□□□□ -1.24
LINC00458-202ENST00000427299 TMEM209Q96SK2 561 aa7.31□□□□□ -1.24
LINC00458-202ENST00000427299 PCDHA2Q9Y5H9 948 aa7.31□□□□□ -1.24
LINC00458-202ENST00000427299 CYP7B1O75881 506 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 CPP00450 1065 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 ERCC5P28715 1186 aaPredicted RBP7.3□□□□□ -1.24
LINC00458-202ENST00000427299 GFRA1P56159 465 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 PPP2CBP62714 309 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 PPP2CAP67775 309 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 LSAMPQ13449 338 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 PPIL6Q8IXY8 311 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 KBTBD2Q8IY47 623 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.3□□□□□ -1.24
LINC00458-202ENST00000427299 C1orf159Q96HA4 380 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 WRNIP1Q96S55 665 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 CDK5RAP1Q96SZ6 601 aaKnown RBP7.3□□□□□ -1.24
LINC00458-202ENST00000427299 TGIF2Q9GZN2 237 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 ACBD3Q9H3P7 528 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 HSPBP1Q9NZL4 362 aa7.3□□□□□ -1.24
LINC00458-202ENST00000427299 SYNJ1O43426 1573 aa7.29□□□□□ -1.24
LINC00458-202ENST00000427299 B2RBV5 119 aa7.29□□□□□ -1.24
LINC00458-202ENST00000427299 SLPIP03973 132 aa7.29□□□□□ -1.24
LINC00458-202ENST00000427299 ACVRL1P37023 503 aa7.29□□□□□ -1.24
LINC00458-202ENST00000427299 SV2CQ496J9 727 aa7.29□□□□□ -1.24
LINC00458-202ENST00000427299 FAM178BQ8IXR5 827 aa7.29□□□□□ -1.24
LINC00458-202ENST00000427299 FAM9AQ8IZU1 332 aaPredicted RBP7.29□□□□□ -1.24
LINC00458-202ENST00000427299 KLHL36Q8N4N3 616 aa7.29□□□□□ -1.24
LINC00458-202ENST00000427299 WWC2-AS2Q96NR7 200 aa7.29□□□□□ -1.24
LINC00458-202ENST00000427299 CDIP1Q9H305 208 aa7.29□□□□□ -1.24
LINC00458-202ENST00000427299 CROTQ9UKG9 612 aa7.29□□□□□ -1.24
LINC00458-202ENST00000427299 TOP2BQ02880 1626 aa7.29□□□□□ -1.24
LINC00458-202ENST00000427299 HMGXB3Q12766 1538 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 ERICH3Q5RHP9 1530 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 PATE3B3GLJ2 98 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 SMAD7O15105 426 aaKnown RBP7.28□□□□□ -1.24
LINC00458-202ENST00000427299 SUSD5O60279 629 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 IGSF3O75054 1194 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 DGKIO75912 1065 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 CAPNS1P04632 268 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 COL6A1P12109 1028 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 GDF5P43026 501 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 ZC3H6P61129 1189 aaKnown RBP7.28□□□□□ -1.24
LINC00458-202ENST00000427299 R3HDM1Q15032 1099 aaKnown RBP7.28□□□□□ -1.24
LINC00458-202ENST00000427299 ARHGEF18Q6ZSZ5 1173 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 TMEM145Q8NBT3 493 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 ZNF747Q9BV97 191 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 MEGF9Q9H1U4 602 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 EPB41L1Q9H4G0 881 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 CLDND1Q9NY35 253 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 LRP2BPQ9P2M1 347 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 MYOTQ9UBF9 498 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 FTSJ1Q9UET6 329 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 INPP5FQ9Y2H2 1132 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 NPFFR2Q9Y5X5 522 aa7.28□□□□□ -1.24
LINC00458-202ENST00000427299 CYR61O00622 381 aa7.27□□□□□ -1.25
LINC00458-202ENST00000427299 ATF4P18848 351 aaPredicted RBP7.27□□□□□ -1.25
LINC00458-202ENST00000427299 SLC35F1Q5T1Q4 408 aa7.27□□□□□ -1.25
LINC00458-202ENST00000427299 SLFN13Q68D06 897 aa7.27□□□□□ -1.25
LINC00458-202ENST00000427299 TMC5Q6UXY8 1006 aa7.27□□□□□ -1.25
LINC00458-202ENST00000427299 PHOSPHO1Q8TCT1 267 aa7.27□□□□□ -1.25
LINC00458-202ENST00000427299 PTPN18Q99952 460 aa7.27□□□□□ -1.25
LINC00458-202ENST00000427299 ACTR10Q9NZ32 417 aa7.27□□□□□ -1.25
LINC00458-202ENST00000427299 KCNJ6P48051 423 aa7.26□□□□□ -1.25
LINC00458-202ENST00000427299 SELENOPP49908 381 aa7.26□□□□□ -1.25
LINC00458-202ENST00000427299 NFATC3Q12968 1075 aa7.26□□□□□ -1.25
LINC00458-202ENST00000427299 MRM1Q6IN84 353 aaKnown RBP7.26□□□□□ -1.25
LINC00458-202ENST00000427299 ZNF585AQ6P3V2 769 aa7.26□□□□□ -1.25
LINC00458-202ENST00000427299 PROSER1Q86XN7 944 aa7.26□□□□□ -1.25
LINC00458-202ENST00000427299 CHAMP1Q96JM3 812 aa7.26□□□□□ -1.25
LINC00458-202ENST00000427299 TINF2Q9BSI4 451 aa7.26□□□□□ -1.25
LINC00458-202ENST00000427299 SMOC1Q9H4F8 434 aa7.26□□□□□ -1.25
LINC00458-202ENST00000427299 RBPJLQ9UBG7 517 aa7.26□□□□□ -1.25
LINC00458-202ENST00000427299 HMGA2P52926 109 aa7.25□□□□□ -1.25
LINC00458-202ENST00000427299 TNNI3KQ59H18 835 aa7.25□□□□□ -1.25
LINC00458-202ENST00000427299 LARP1BQ659C4 914 aaKnown RBP7.25□□□□□ -1.25
LINC00458-202ENST00000427299 CYP4F22Q6NT55 531 aa7.25□□□□□ -1.25
LINC00458-202ENST00000427299 TRMT10BQ6PF06 316 aaKnown RBP7.25□□□□□ -1.25
LINC00458-202ENST00000427299 VPS11Q9H270 941 aa7.25□□□□□ -1.25
LINC00458-202ENST00000427299 BARX1Q9HBU1 254 aaPredicted RBP7.25□□□□□ -1.25
LINC00458-202ENST00000427299 JADE2Q9NQC1 790 aa7.25□□□□□ -1.25
LINC00458-202ENST00000427299 ASH2LQ9UBL3 628 aa7.25□□□□□ -1.25
LINC00458-202ENST00000427299 ADAM29Q9UKF5 820 aa7.25□□□□□ -1.25
LINC00458-202ENST00000427299 B4GALT4O60513 344 aa7.24□□□□□ -1.25
LINC00458-202ENST00000427299 FZD7O75084 574 aa7.24□□□□□ -1.25
LINC00458-202ENST00000427299 NAALADL2Q58DX5 795 aa7.24□□□□□ -1.25
LINC00458-202ENST00000427299 ZFPM1Q8IX07 1006 aa7.24□□□□□ -1.25
LINC00458-202ENST00000427299 PALM2Q8IXS6 379 aa7.24□□□□□ -1.25
LINC00458-202ENST00000427299 SLC43A3Q8NBI5 491 aa7.24□□□□□ -1.25
LINC00458-202ENST00000427299 NUDT10Q8NFP7 164 aa7.24□□□□□ -1.25
LINC00458-202ENST00000427299 TTLL11Q8NHH1 800 aa7.24□□□□□ -1.25
LINC00458-202ENST00000427299 NUDT11Q96G61 164 aa7.24□□□□□ -1.25
LINC00458-202ENST00000427299 DEF6Q9H4E7 631 aa7.24□□□□□ -1.25
LINC00458-202ENST00000427299 CCSER2Q9H7U1 834 aa7.24□□□□□ -1.25
LINC00458-202ENST00000427299 MRVI1Q9Y6F6 885 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms