RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 IFNAR2P48551 515 aa18.25■□□□□ 0.51
PKP4-204ENST00000421462 STAMBPL1Q96FJ0 436 aa18.25■□□□□ 0.51
PKP4-204ENST00000421462 BIN2Q9UBW5 565 aaPredicted RBP18.25■□□□□ 0.51
PKP4-204ENST00000421462 ANAPC4Q9UJX5 808 aa18.25■□□□□ 0.51
PKP4-204ENST00000421462 PNMA2Q9UL42 364 aa18.25■□□□□ 0.51
PKP4-204ENST00000421462 KRIT1O00522 736 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 PJA2O43164 708 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 EVA1CP58658 441 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 MEI1Q5TIA1 1274 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 CD302Q8IX05 232 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 RNF10Q8N5U6 811 aaKnown RBP18.24■□□□□ 0.51
PKP4-204ENST00000421462 PLCB1Q9NQ66 1216 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 SLC12A6Q9UHW9 1150 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 LMTK3Q96Q04 1460 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 FLT1P17948 1338 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 POTEMA6NI47 508 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 TULP1O00294 542 aaPredicted RBP18.24■□□□□ 0.51
PKP4-204ENST00000421462 TTI1O43156 1089 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 NAB2Q15742 525 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 CENPPQ6IPU0 288 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 RUFY4Q6ZNE9 571 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 LRRC45Q96CN5 670 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 TACO1Q9BSH4 297 aaKnown RBP18.24■□□□□ 0.51
PKP4-204ENST00000421462 LUC7LQ9NQ29 371 aaKnown RBP18.24■□□□□ 0.51
PKP4-204ENST00000421462 GLI3P10071 1580 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 ASTE1Q2TB18 679 aaPredicted RBP18.24■□□□□ 0.51
PKP4-204ENST00000421462 MREGQ8N565 214 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 ISCUQ9H1K1 167 aa18.24■□□□□ 0.51
PKP4-204ENST00000421462 LCA5LO95447 670 aa18.23■□□□□ 0.51
PKP4-204ENST00000421462 LRCH2Q5VUJ6 765 aa18.23■□□□□ 0.51
PKP4-204ENST00000421462 A0A1B0GUA9 196 aa18.23■□□□□ 0.51
PKP4-204ENST00000421462 C21orf2O43822 256 aa18.23■□□□□ 0.51
PKP4-204ENST00000421462 ACTN1P12814 892 aa18.23■□□□□ 0.51
PKP4-204ENST00000421462 BYSLQ13895 437 aaKnown RBP18.23■□□□□ 0.51
PKP4-204ENST00000421462 C7orf25Q9BPX7 421 aa18.23■□□□□ 0.51
PKP4-204ENST00000421462 TRIM51Q9BSJ1 452 aa18.23■□□□□ 0.51
PKP4-204ENST00000421462 PARP4Q9UKK3 1724 aaKnown RBP18.23■□□□□ 0.51
PKP4-204ENST00000421462 SERPING1P05155 500 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 MYL1P05976 194 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 PLCB4Q15147 1175 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 WLSQ5T9L3 541 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 RCSD1Q6JBY9 416 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 TMED8Q6PL24 325 aaPredicted RBP18.22■□□□□ 0.51
PKP4-204ENST00000421462 NOD2Q9HC29 1040 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 RNF14Q9UBS8 474 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 CD2APQ9Y5K6 639 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 CYTH3O43739 400 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 VIMP08670 466 aaKnown RBP18.22■□□□□ 0.51
PKP4-204ENST00000421462 ECHS1P30084 290 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 TEX11Q8IYF3 940 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 SLC44A5Q8NCS7 719 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 ZNF384Q8TF68 577 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 TSG101Q99816 390 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 PAGR1Q9BTK6 254 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 MKNK2Q9HBH9 465 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 DCP1AQ9NPI6 582 aaPredicted RBP18.22■□□□□ 0.51
PKP4-204ENST00000421462 TMEM260Q9NX78 707 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.22■□□□□ 0.51
PKP4-204ENST00000421462 CAMTA1Q9Y6Y1 1673 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 KCPQ6ZWJ8 1503 aa18.22■□□□□ 0.51
PKP4-204ENST00000421462 H0YGN5 161 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 SLCO1A2P46721 670 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 TAX1BP1Q86VP1 789 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 ANKS1AQ92625 1134 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 ELAC2Q9BQ52 826 aaKnown RBP18.21■□□□□ 0.51
PKP4-204ENST00000421462 NUDT12Q9BQG2 462 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 ATP6V0A2Q9Y487 856 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 NFS1Q9Y697 457 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 NSMCE1Q8WV22 266 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 MMTAG2Q9BU76 263 aaKnown RBP18.21■□□□□ 0.51
PKP4-204ENST00000421462 TRIM6Q9C030 488 aaPredicted RBP18.21■□□□□ 0.51
PKP4-204ENST00000421462 TFCP2L1Q9NZI6 479 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 NOC2LQ9Y3T9 749 aaKnown RBP18.21■□□□□ 0.51
PKP4-204ENST00000421462 SMCO2A6NFE2 343 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 CAND2O75155 1236 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 SLC18A3Q16572 532 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 SLC35G1Q2M3R5 365 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 NBPF9Q3BBW0 867 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 DAAM2Q86T65 1068 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 TBCKQ8TEA7 893 aa18.21■□□□□ 0.51
PKP4-204ENST00000421462 SSU72P8A0A1W2PR75 194 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 MARCH6O60337 910 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 NOL4O94818 638 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 KIF4AO95239 1232 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 FGFR1OPO95684 399 aaKnown RBP18.2■□□□□ 0.5
PKP4-204ENST00000421462 ELF3P78545 371 aaPredicted RBP18.2■□□□□ 0.5
PKP4-204ENST00000421462 DRP2Q13474 957 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 ASIC2Q16515 512 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 CCDC63Q8NA47 563 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 LARP4BQ92615 738 aaKnown RBP18.2■□□□□ 0.5
PKP4-204ENST00000421462 DDX12PQ92771 950 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 TATDN2Q93075 761 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 NLRP3Q96P20 1036 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 SPAG5Q96R06 1193 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.2■□□□□ 0.5
PKP4-204ENST00000421462 CCDC189A1A4V9 331 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 ATP6V1G2O95670 118 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 METTL13Q8N6R0 699 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 FAXDC2Q96IV6 333 aa18.2■□□□□ 0.5
PKP4-204ENST00000421462 SLC4A9Q96Q91 983 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms