RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 CYLC1P35663 651 aaPredicted RBP17.93■□□□□ 0.46
CTSB-203ENST00000420692 KRT83P78385 493 aa17.93■□□□□ 0.46
CTSB-203ENST00000420692 SLC15A2Q16348 729 aa17.93■□□□□ 0.46
CTSB-203ENST00000420692 TBC1D5Q92609 795 aa17.93■□□□□ 0.46
CTSB-203ENST00000420692 PURBQ96QR8 312 aaKnown RBP17.93■□□□□ 0.46
CTSB-203ENST00000420692 PNKPQ96T60 521 aa17.93■□□□□ 0.46
CTSB-203ENST00000420692 MMRN2Q9H8L6 949 aa17.93■□□□□ 0.46
CTSB-203ENST00000420692 ZNHIT6Q9NWK9 470 aaKnown RBP17.93■□□□□ 0.46
CTSB-203ENST00000420692 CLRN2A0PK11 232 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 SPDYE2BA6NHP3 402 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 MEIS1O00470 390 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 MSH4O15457 936 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 SLC26A4O43511 780 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 FGFR1OPO95684 399 aaKnown RBP17.92■□□□□ 0.46
CTSB-203ENST00000420692 ATP1A1P05023 1023 aaKnown RBP17.92■□□□□ 0.46
CTSB-203ENST00000420692 SPDYE6P0CI01 402 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 CIITAP33076 1130 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 FKBP3Q00688 224 aaKnown RBP17.92■□□□□ 0.46
CTSB-203ENST00000420692 IKQ13123 557 aaPredicted RBP17.92■□□□□ 0.46
CTSB-203ENST00000420692 HERC4Q5GLZ8 1057 aaPredicted RBP17.92■□□□□ 0.46
CTSB-203ENST00000420692 NCAPH2Q6IBW4 605 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 GPIHBP1Q8IV16 184 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 CDAN1Q8IWY9 1227 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 NELFCDQ8IXH7 590 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 JAKMIP2Q96AA8 810 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 GMLQ99445 158 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 BCAS3Q9H6U6 928 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 BMP2KQ9NSY1 1161 aaPredicted RBP17.92■□□□□ 0.46
CTSB-203ENST00000420692 VAV3Q9UKW4 847 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 TRAF5O00463 557 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 TBX3O15119 743 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 CASP5P51878 434 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 WHAMMP3Q1A5X7 153 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 CCDC65Q8IXS2 484 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 NOA1Q8NC60 698 aaKnown RBP17.92■□□□□ 0.46
CTSB-203ENST00000420692 SMCR8Q8TEV9 937 aaPredicted RBP17.92■□□□□ 0.46
CTSB-203ENST00000420692 TSG101Q99816 390 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.92■□□□□ 0.46
CTSB-203ENST00000420692 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.92■□□□□ 0.46
CTSB-203ENST00000420692 COL4A3BPQ9Y5P4 624 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 CNTNAP1P78357 1384 aa17.92■□□□□ 0.46
CTSB-203ENST00000420692 NOL4O94818 638 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 HOXD13P35453 343 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 GIT2Q14161 759 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 EZH2Q15910 746 aaKnown RBP17.91■□□□□ 0.46
CTSB-203ENST00000420692 SLC30A10Q6XR72 485 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 KIAA1328Q86T90 577 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 ZC3H3Q8IXZ2 948 aaKnown RBP17.91■□□□□ 0.46
CTSB-203ENST00000420692 MSANTD4Q8NCY6 345 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 SPDYE3A6NKU9 549 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 LRRC53A6NM62 1247 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 FOSP01100 380 aaPredicted RBP17.91■□□□□ 0.46
CTSB-203ENST00000420692 RPA1P27694 616 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 PAPD7Q5XG87 772 aaKnown RBP17.91■□□□□ 0.46
CTSB-203ENST00000420692 CCDC84Q86UT8 332 aaPredicted RBP17.91■□□□□ 0.46
CTSB-203ENST00000420692 IQCDQ96DY2 449 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 UBXN6Q9BZV1 441 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 EMILIN3Q9NT22 766 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 RAB21Q9UL25 225 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 RGPD3A6NKT7 1758 aaPredicted RBP17.91■□□□□ 0.46
CTSB-203ENST00000420692 RGPD4Q7Z3J3 1758 aa17.91■□□□□ 0.46
CTSB-203ENST00000420692 IGLV3-22A0A075B6J6 115 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 EML1O00423 815 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 SRGAP2O75044 1071 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 RAD17O75943 681 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 CYP3A4P08684 503 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 EIF4A3P38919 411 aaKnown RBP17.9■□□□□ 0.46
CTSB-203ENST00000420692 PABPC4Q13310 644 aaKnown RBP eCLIP17.9■□□□□ 0.464e-12■■■■■ 77.3
CTSB-203ENST00000420692 RSBN1LQ6PCB5 846 aaPredicted RBP17.9■□□□□ 0.46
CTSB-203ENST00000420692 RRAGAQ7L523 313 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 TRIM59Q8IWR1 403 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 FUT8Q9BYC5 575 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 ZNF70Q9UC06 446 aaPredicted RBP17.9■□□□□ 0.46
CTSB-203ENST00000420692 HERC5Q9UII4 1024 aaKnown RBP17.9■□□□□ 0.46
CTSB-203ENST00000420692 PITPNM2Q9BZ72 1349 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 MYH10P35580 1976 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 PIK3CDO00329 1044 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 LCA5LO95447 670 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 POLD1P28340 1107 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 VAV2P52735 878 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 APBA1Q02410 837 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 MCTP2Q6DN12 878 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 SYT2Q8N9I0 419 aaPredicted RBP17.9■□□□□ 0.46
CTSB-203ENST00000420692 SUPT20HQ8NEM7 779 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 CCDC42Q96M95 316 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 FAM20AQ96MK3 541 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 CEP63Q96MT8 703 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 TMX2Q9Y320 296 aa17.9■□□□□ 0.46
CTSB-203ENST00000420692 KRT86O43790 486 aa17.89■□□□□ 0.45
CTSB-203ENST00000420692 MARSP56192 900 aaKnown RBP17.89■□□□□ 0.45
CTSB-203ENST00000420692 ASTE1Q2TB18 679 aaPredicted RBP17.89■□□□□ 0.45
CTSB-203ENST00000420692 HGSNATQ68CP4 663 aa17.89■□□□□ 0.45
CTSB-203ENST00000420692 PDXDC1Q6P996 788 aa17.89■□□□□ 0.45
CTSB-203ENST00000420692 CAMKK2Q96RR4 588 aa17.89■□□□□ 0.45
CTSB-203ENST00000420692 WDR18Q9BV38 432 aa17.89■□□□□ 0.45
CTSB-203ENST00000420692 PRDM4Q9UKN5 801 aa17.89■□□□□ 0.45
CTSB-203ENST00000420692 SYNPO2Q9UMS6 1093 aa17.89■□□□□ 0.45
CTSB-203ENST00000420692 ZBTB12Q9Y330 459 aaPredicted RBP17.89■□□□□ 0.45
CTSB-203ENST00000420692 CCDC151A5D8V7 595 aa17.88■□□□□ 0.45
CTSB-203ENST00000420692 ATP8B1O43520 1251 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms