RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 PAK1Q13153 545 aa5.51□□□□□ -1.53
HMGB3P23-201ENST00000414981 TEPPQ6URK8 271 aa5.51□□□□□ -1.53
HMGB3P23-201ENST00000414981 UHMK1Q8TAS1 419 aaKnown RBP5.51□□□□□ -1.53
HMGB3P23-201ENST00000414981 PMFBP1Q8TBY8 1022 aa5.51□□□□□ -1.53
HMGB3P23-201ENST00000414981 THAP3Q8WTV1 239 aaPredicted RBP5.51□□□□□ -1.53
HMGB3P23-201ENST00000414981 CLEC4DQ8WXI8 215 aa5.51□□□□□ -1.53
HMGB3P23-201ENST00000414981 OSBPL2Q9H1P3 480 aa5.51□□□□□ -1.53
HMGB3P23-201ENST00000414981 NTMQ9P121 344 aa5.51□□□□□ -1.53
HMGB3P23-201ENST00000414981 MRPS23Q9Y3D9 190 aaKnown RBP5.51□□□□□ -1.53
HMGB3P23-201ENST00000414981 OTOL1A6NHN0 477 aaPredicted RBP5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 SLC27A2O14975 620 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 GNAT1P11488 350 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 COL6A2P12110 1019 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 RPL13P26373 211 aaKnown RBP5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 THBS2P35442 1172 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 STAT5AP42229 794 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 EPHA5P54756 1037 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 ITGA1P56199 1179 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 CTSWP56202 376 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 NFE2L2Q16236 605 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 FRMD5Q7Z6J6 570 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 KCNJ15Q99712 375 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 IPPKQ9H8X2 491 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 TRAF6Q9Y4K3 522 aa5.5□□□□□ -1.53
HMGB3P23-201ENST00000414981 A0A1B0GTL3 188 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 ARVCFO00192 962 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 GSTA4O15217 222 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 EFCAB14O75071 495 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 SMAD4Q13485 552 aaKnown RBP5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 PRR31Q5SQ13 230 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 LCE1DQ5T752 114 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 C16orf59Q7L2K0 433 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 ADGRG2Q8IZP9 1017 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 ZSWIM2Q8NEG5 633 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 PCDH19Q8TAB3 1148 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 FEZF2Q8TBJ5 459 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 FBXW5Q969U6 566 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 TMEM209Q96SK2 561 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 DNAJC2Q99543 621 aaKnown RBP5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 SYT3Q9BQG1 590 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 DSEQ9UL01 958 aa5.49□□□□□ -1.53
HMGB3P23-201ENST00000414981 NKRFO15226 690 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 NOBOXO60393 691 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 CYP7B1O75881 506 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 FAHP16930 419 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 GUCY1A3Q02108 690 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 ADAM9Q13443 819 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 TUSC3Q13454 348 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 GPR19Q15760 415 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 ZFYVE27Q5T4F4 411 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 LCE4AQ5TA78 99 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 NLGN4XQ8N0W4 816 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 LILRB2Q8N423 598 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 SYT8Q8NBV8 401 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 UBXN4Q92575 508 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 RELTQ969Z4 430 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 SPATA25Q9BR10 227 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 RTEL1Q9NZ71 1219 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 CDK11AQ9UQ88 783 aaPredicted RBP5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 PCDHA8Q9Y5H6 950 aa5.48□□□□□ -1.53
HMGB3P23-201ENST00000414981 A0A0G2JLL6 359 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 KCNQ2O43526 872 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 KIAA2012Q0VF49 1180 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 C2orf27AQ580R0 203 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 TRIM61Q5EBN2 209 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 FAM26FQ5R3K3 315 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 MTDHQ86UE4 582 aaKnown RBP5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 STK32CQ86UX6 486 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 ZNF761Q86XN6 746 aaPredicted RBP5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 ZDHHC14Q8IZN3 488 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 GSTCDQ8NEC7 633 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 CXorf38Q8TB03 319 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 ADAMTS17Q8TE56 1095 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 TEPSINQ96N21 525 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 CLIC6Q96NY7 704 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 PCDHA9Q9Y5H5 950 aa5.47□□□□□ -1.53
HMGB3P23-201ENST00000414981 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 TCRBV5S4A2TA0A5A2 114 aa5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 CRTAMO95727 393 aa5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 APPP05067 770 aa5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 ENO2P09104 434 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 IL13P35225 146 aa5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 LACTBP83111 547 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 NFIXQ14938 502 aa5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 PAN2Q504Q3 1202 aaKnown RBP5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 NT5DC1Q5TFE4 455 aa5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 KCTD1Q719H9 257 aa5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 PROSER1Q86XN7 944 aa5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 RBM12BQ8IXT5 1001 aaKnown RBP5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 MAGEB10Q96LZ2 347 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 WRNIP1Q96S55 665 aa5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 MRPL4Q9BYD3 311 aaKnown RBP5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 WASF3Q9UPY6 502 aa5.46□□□□□ -1.54
HMGB3P23-201ENST00000414981 DDX3XO00571 662 aaKnown RBP eCLIP5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 FOXD2O60548 495 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 GJA9P57773 515 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 ST5P78524 1137 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 GRIN1Q05586 938 aa5.45□□□□□ -1.54
HMGB3P23-201ENST00000414981 CRY1Q16526 586 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms