RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 FAM184BQ9ULE4 1060 aa10.09□□□□□ -0.79
BRCC3-206ENST00000399042 PTPN22Q9Y2R2 807 aa10.09□□□□□ -0.79
BRCC3-206ENST00000399042 SAMM50Q9Y512 469 aa10.09□□□□□ -0.79
BRCC3-206ENST00000399042 UBIAD1Q9Y5Z9 338 aa10.09□□□□□ -0.79
BRCC3-206ENST00000399042 FRMPD4Q14CM0 1322 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 PARP14Q460N5 1801 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 LAD1O00515 517 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 SPTLC2O15270 562 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 SLC37A4O43826 429 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 PPP1R37O75864 691 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 SNAI1O95863 264 aaPredicted RBP10.08□□□□□ -0.8
BRCC3-206ENST00000399042 INHAP05111 366 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 TGFB3P10600 412 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 EDNRBP24530 442 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 MARCKSP29966 332 aaPredicted RBP10.08□□□□□ -0.8
BRCC3-206ENST00000399042 ADCYAP1R1P41586 468 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 TNFAIP2Q03169 654 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 ZRSR1Q15695 479 aaKnown RBP10.08□□□□□ -0.8
BRCC3-206ENST00000399042 PKN2Q16513 984 aaKnown RBP10.08□□□□□ -0.8
BRCC3-206ENST00000399042 LY6KQ17RY6 165 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 CCDC144BQ3MJ40 725 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 BRDTQ58F21 947 aaPredicted RBP10.08□□□□□ -0.8
BRCC3-206ENST00000399042 IQSEC1Q6DN90 963 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 MAMSTRQ6ZN01 415 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 KCNG4Q8TDN1 519 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 PXYLP1Q8TE99 480 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 SH3TC2Q8TF17 1288 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 TRIB2Q92519 343 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 FGD4Q96M96 766 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 FAM20AQ96MK3 541 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 INPP4AQ96PE3 977 aaPredicted RBP10.08□□□□□ -0.8
BRCC3-206ENST00000399042 USP28Q96RU2 1077 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 TEKT3Q9BXF9 490 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 FTOQ9C0B1 505 aaKnown RBP eCLIP10.08□□□□□ -0.8
BRCC3-206ENST00000399042 SPC25Q9HBM1 224 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 AGO4Q9HCK5 861 aaKnown RBP10.08□□□□□ -0.8
BRCC3-206ENST00000399042 HMX1Q9NP08 348 aaPredicted RBP10.08□□□□□ -0.8
BRCC3-206ENST00000399042 PDGFCQ9NRA1 345 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.08□□□□□ -0.8
BRCC3-206ENST00000399042 TBC1D22BQ9NU19 505 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 POLR3EQ9NVU0 708 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 NRBP1Q9UHY1 535 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 PCDHA12Q9UN75 941 aa10.08□□□□□ -0.8
BRCC3-206ENST00000399042 ASTN1O14525 1302 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 CEP350Q5VT06 3117 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 VWA3AA6NCI4 1184 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 SPATA31C2B4DYI2 1134 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 MSH4O15457 936 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 DYNC1LI2O43237 492 aaPredicted RBP10.07□□□□□ -0.8
BRCC3-206ENST00000399042 GGPS1O95749 300 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 GH1P01241 217 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 RARBP10826 455 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 AKR1A1P14550 325 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 TXLNAP40222 546 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 TECP42680 631 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 CAP1Q01518 475 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 CACNB2Q08289 660 aaPredicted RBP10.07□□□□□ -0.8
BRCC3-206ENST00000399042 NCAPH2Q6IBW4 605 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 CYFIP1Q7L576 1253 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 KRI1Q8N9T8 703 aaKnown RBP10.07□□□□□ -0.8
BRCC3-206ENST00000399042 OR6J1Q8NGC5 347 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 ERMNQ8TAM6 284 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 MORC4Q8TE76 937 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 GJA10Q969M2 543 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 CDK5RAP3Q96JB5 506 aa10.07□□□□□ -0.8
BRCC3-206ENST00000399042 TTC12Q9H892 705 aaPredicted RBP10.07□□□□□ -0.8
BRCC3-206ENST00000399042 JPH1Q9HDC5 661 aaPredicted RBP10.07□□□□□ -0.8
BRCC3-206ENST00000399042 WNT7AO00755 349 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 BACH1O14867 736 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 TBX3O15119 743 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 NKRFO15226 690 aaKnown RBP eCLIP10.06□□□□□ -0.8
BRCC3-206ENST00000399042 YEATS4O95619 227 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 NASPP49321 788 aaPredicted RBP10.06□□□□□ -0.8
BRCC3-206ENST00000399042 CHMP4BP1P59074 171 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 TRIM32Q13049 653 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 LAMC2Q13753 1193 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 SLC39A14Q15043 492 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 FBXO46Q6PJ61 603 aaPredicted RBP10.06□□□□□ -0.8
BRCC3-206ENST00000399042 MIER3Q7Z3K6 550 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 CRYGNQ8WXF5 182 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 FERMT2Q96AC1 680 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 CHAMP1Q96JM3 812 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 SPATA33Q96N06 139 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 RIT2Q99578 217 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 TMEM60Q9H2L4 133 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 GDPD2Q9HCC8 539 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 PRDM10Q9NQV6 1147 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 SLC9A2Q9UBY0 812 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 LRWD1Q9UFC0 647 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 DDX41Q9UJV9 622 aaKnown RBP10.06□□□□□ -0.8
BRCC3-206ENST00000399042 SMCHD1A6NHR9 2005 aa10.06□□□□□ -0.8
BRCC3-206ENST00000399042 PCNTO95613 3336 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 IGLV3-22A0A075B6J6 115 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 SEPT4O43236 478 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 ZEB2O60315 1214 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 RGS20O76081 388 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 ZNF865P0CJ78 1059 aaPredicted RBP10.05□□□□□ -0.8
BRCC3-206ENST00000399042 SMPD1P17405 629 aa10.05□□□□□ -0.8
BRCC3-206ENST00000399042 UBA1P22314 1058 aaKnown RBP10.05□□□□□ -0.8
BRCC3-206ENST00000399042 ICAM3P32942 547 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms