RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 C21orf2O43822 256 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 FGFR1OPO95684 399 aaKnown RBP26.31■■□□□ 1.8
PABPN1-202ENST00000397276 ATP1A1P05023 1023 aaKnown RBP26.31■■□□□ 1.8
PABPN1-202ENST00000397276 PSMC6P62333 389 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 STYK1Q6J9G0 422 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 RRAGAQ7L523 313 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 CYP2W1Q8TAV3 490 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 KDM3AQ9Y4C1 1321 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 SPDYE3A6NKU9 549 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 YDJCA8MPS7 323 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 PPIP5K2O43314 1243 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 ECE1P42892 770 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 SYDE2Q5VT97 1194 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 GLT8D2Q9H1C3 349 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 SLX4Q8IY92 1834 aa26.31■■□□□ 1.8
PABPN1-202ENST00000397276 CTAGE15A4D2H0 777 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 FAM86B1E9PN63 330 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 MYO1CO00159 1063 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 KRT86O43790 486 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 FAM86B2P0C5J1 330 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 CTAGE8P0CG41 777 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 BMP3P12645 472 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 CCDC40Q4G0X9 1142 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 FOXR1Q6PIV2 292 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 SLC30A10Q6XR72 485 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 CTAGE6Q86UF2 777 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 CTAGE4Q8IX94 777 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 ABCB6Q9NP58 842 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 ZNF263O14978 683 aa26.3■■□□□ 1.8
PABPN1-202ENST00000397276 CYP11B2P19099 503 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 AMPD2Q01433 879 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 CATSPER3Q86XQ3 398 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 CAPZA3Q96KX2 299 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 RNF216Q9NWF9 866 aaPredicted RBP26.29■■□□□ 1.8
PABPN1-202ENST00000397276 ARHGAP20Q9P2F6 1191 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 C10orf71Q711Q0 1435 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 PABPC4Q13310 644 aaKnown RBP eCLIP26.29■■□□□ 1.87e-7■■■■□ 21.5
PABPN1-202ENST00000397276 CCDC65Q8IXS2 484 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 NOA1Q8NC60 698 aaKnown RBP26.29■■□□□ 1.8
PABPN1-202ENST00000397276 EXOC4Q96A65 974 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 NAP1L4Q99733 375 aaKnown RBP26.29■■□□□ 1.8
PABPN1-202ENST00000397276 SIPA1L1O43166 1804 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 GREB1LQ9C091 1923 aaPredicted RBP26.29■■□□□ 1.8
PABPN1-202ENST00000397276 A0A1W2PQJ5 194 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 LRRC53A6NM62 1247 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 EIF3CLB5ME19 914 aaKnown RBP26.29■■□□□ 1.8
PABPN1-202ENST00000397276 PHACTR2O75167 634 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 FKBP3Q00688 224 aaKnown RBP26.29■■□□□ 1.8
PABPN1-202ENST00000397276 CYP4A11Q02928 519 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 FIGNQ5HY92 759 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 HYIQ5T013 277 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 CCDC170Q8IYT3 715 aa26.29■■□□□ 1.8
PABPN1-202ENST00000397276 EIF3CQ99613 913 aaKnown RBP26.29■■□□□ 1.8
PABPN1-202ENST00000397276 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.29■■□□□ 1.8
PABPN1-202ENST00000397276 FKBP1AP62942 108 aaKnown RBP26.28■■□□□ 1.8
PABPN1-202ENST00000397276 ARSHQ5FYA8 562 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 CNKSR1Q969H4 720 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 CRACR2AQ9BSW2 395 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 DEF6Q9H4E7 631 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.28■■□□□ 1.8
PABPN1-202ENST00000397276 NLRC4Q9NPP4 1024 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 PLAGL2Q9UPG8 496 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 BRD3Q15059 726 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 SPA17Q15506 151 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 WHAMMP3Q1A5X7 153 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 SLFN12Q8IYM2 578 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 ETNPPLQ8TBG4 499 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 COL4A3BPQ9Y5P4 624 aa26.28■■□□□ 1.8
PABPN1-202ENST00000397276 CYP3A7-CYP3A51PA0A087WV96 503 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 PSMD14O00487 310 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 CYP3A7P24462 503 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 APBA1Q02410 837 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 AP3B2Q13367 1082 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 TUBB2AQ13885 445 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 GMCL1P1Q8NEA9 526 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 TUBB2BQ9BVA1 445 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 RAD17O75943 681 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 CC2D2BQ6DHV5 1058 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 CACNA2D4Q7Z3S7 1137 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 CCDC84Q86UT8 332 aaPredicted RBP26.27■■□□□ 1.8
PABPN1-202ENST00000397276 GMCL1Q96IK5 515 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 EMILIN3Q9NT22 766 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 FAN1Q9Y2M0 1017 aa26.27■■□□□ 1.8
PABPN1-202ENST00000397276 ZNF76P36508 570 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 EIF4A3P38919 411 aaKnown RBP26.26■■□□□ 1.79
PABPN1-202ENST00000397276 ZYXQ15942 572 aaKnown RBP26.26■■□□□ 1.79
PABPN1-202ENST00000397276 ZCWPW2Q504Y3 356 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 GOLGA5Q8TBA6 731 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 ACER1Q8TDN7 264 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 SCFD1Q8WVM8 642 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 C7orf43Q8WVR3 580 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 RSPH14Q9UHP6 348 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 PCDHA2Q9Y5H9 948 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 OPLAHO14841 1288 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 VSNL1P62760 191 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 SPIRE1Q08AE8 756 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 KCNMA1Q12791 1236 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 KIF5AQ12840 1032 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 TBC1D5Q92609 795 aa26.26■■□□□ 1.79
PABPN1-202ENST00000397276 PRR12Q9ULL5 1215 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms