RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 SDF4Q9BRK5 362 aa33.38■■■□□ 2.93
CHCHD4-202ENST00000396914 HSP90AA1P07900 732 aaKnown RBP33.37■■■□□ 2.93
CHCHD4-202ENST00000396914 KCNA2P16389 499 aa33.37■■■□□ 2.93
CHCHD4-202ENST00000396914 CIITAP33076 1130 aa33.37■■■□□ 2.93
CHCHD4-202ENST00000396914 CHMP4BP1P59074 171 aa33.37■■■□□ 2.93
CHCHD4-202ENST00000396914 DGKDQ16760 1214 aa33.37■■■□□ 2.93
CHCHD4-202ENST00000396914 EARS2Q5JPH6 523 aaKnown RBP33.37■■■□□ 2.93
CHCHD4-202ENST00000396914 AGO4Q9HCK5 861 aaKnown RBP33.37■■■□□ 2.93
CHCHD4-202ENST00000396914 IGLV3-22A0A075B6J6 115 aa33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 FAM205CA6NFA0 338 aa33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 KPNA6O60684 536 aa33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 HSDL1Q3SXM5 330 aa33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 LARP1BQ659C4 914 aaKnown RBP33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 ZNF577Q9BSK1 485 aa33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 DOCK5Q9H7D0 1870 aa33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 CABYRO75952 493 aa33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 TDP2O95551 362 aa33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 MCTP1Q6DN14 999 aa33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 SLC39A5Q6ZMH5 540 aa33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 TNFRSF25Q93038 417 aa33.36■■■□□ 2.93
CHCHD4-202ENST00000396914 MTG1Q9BT17 334 aaPredicted RBP33.35■■■□□ 2.93
CHCHD4-202ENST00000396914 MKI67P46013 3256 aaKnown RBP33.34■■■□□ 2.93
CHCHD4-202ENST00000396914 DDX39AO00148 427 aaKnown RBP33.34■■■□□ 2.93
CHCHD4-202ENST00000396914 IPO5O00410 1097 aaKnown RBP33.34■■■□□ 2.93
CHCHD4-202ENST00000396914 CCNT1O60563 726 aaKnown RBP33.34■■■□□ 2.93
CHCHD4-202ENST00000396914 PURAQ00577 322 aaKnown RBP33.34■■■□□ 2.93
CHCHD4-202ENST00000396914 LRRC26Q2I0M4 334 aa33.34■■■□□ 2.93
CHCHD4-202ENST00000396914 INTS4Q96HW7 963 aaKnown RBP33.34■■■□□ 2.93
CHCHD4-202ENST00000396914 FOXP1Q9H334 677 aaPredicted RBP33.34■■■□□ 2.93
CHCHD4-202ENST00000396914 DDX25Q9UHL0 483 aaKnown RBP33.34■■■□□ 2.93
CHCHD4-202ENST00000396914 EDIL3O43854 480 aa33.33■■■□□ 2.93
CHCHD4-202ENST00000396914 NAP1L4Q99733 375 aaKnown RBP33.33■■■□□ 2.93
CHCHD4-202ENST00000396914 JPH1Q9HDC5 661 aaPredicted RBP33.33■■■□□ 2.93
CHCHD4-202ENST00000396914 ELP1O95163 1332 aa33.33■■■□□ 2.93
CHCHD4-202ENST00000396914 ATP2B1P20020 1258 aa33.32■■■□□ 2.92
CHCHD4-202ENST00000396914 PSMC6P62333 389 aa33.32■■■□□ 2.92
CHCHD4-202ENST00000396914 ITGB3BPQ13352 177 aaPredicted RBP33.32■■■□□ 2.92
CHCHD4-202ENST00000396914 SLC9A2Q9UBY0 812 aa33.32■■■□□ 2.92
CHCHD4-202ENST00000396914 TCEAL9Q9UHQ7 104 aa33.32■■■□□ 2.92
CHCHD4-202ENST00000396914 ATP11BQ9Y2G3 1177 aa33.32■■■□□ 2.92
CHCHD4-202ENST00000396914 A0A0U1RQG5 324 aaPredicted RBP33.31■■■□□ 2.92
CHCHD4-202ENST00000396914 EVI5O60447 810 aa33.31■■■□□ 2.92
CHCHD4-202ENST00000396914 PPFIA4O75335 1185 aa33.31■■■□□ 2.92
CHCHD4-202ENST00000396914 NFASCO94856 1347 aa33.31■■■□□ 2.92
CHCHD4-202ENST00000396914 ZNF286BP0CG31 522 aa33.31■■■□□ 2.92
CHCHD4-202ENST00000396914 GPR20Q99678 358 aa33.31■■■□□ 2.92
CHCHD4-202ENST00000396914 CYP3A7-CYP3A51PA0A087WV96 503 aa33.3■■■□□ 2.92
CHCHD4-202ENST00000396914 CYP3A7P24462 503 aa33.3■■■□□ 2.92
CHCHD4-202ENST00000396914 RTP1P59025 263 aa33.3■■■□□ 2.92
CHCHD4-202ENST00000396914 Q4G0T1 1027 aa33.3■■■□□ 2.92
CHCHD4-202ENST00000396914 UTP14CQ5TAP6 766 aaKnown RBP33.3■■■□□ 2.92
CHCHD4-202ENST00000396914 MOXD1Q6UVY6 613 aa33.3■■■□□ 2.92
CHCHD4-202ENST00000396914 LENG9Q96B70 501 aa33.3■■■□□ 2.92
CHCHD4-202ENST00000396914 TELO2Q9Y4R8 837 aa33.3■■■□□ 2.92
CHCHD4-202ENST00000396914 MSH4O15457 936 aa33.29■■■□□ 2.92
CHCHD4-202ENST00000396914 MARCH6O60337 910 aa33.29■■■□□ 2.92
CHCHD4-202ENST00000396914 GCFC2P16383 781 aaKnown RBP33.29■■■□□ 2.92
CHCHD4-202ENST00000396914 ITGA7Q13683 1181 aa33.29■■■□□ 2.92
CHCHD4-202ENST00000396914 NOSTRINQ8IVI9 506 aa33.29■■■□□ 2.92
CHCHD4-202ENST00000396914 TBC1D22BQ9NU19 505 aa33.29■■■□□ 2.92
CHCHD4-202ENST00000396914 PDCP20941 246 aa33.28■■■□□ 2.92
CHCHD4-202ENST00000396914 TRIM60Q495X7 471 aa33.28■■■□□ 2.92
CHCHD4-202ENST00000396914 C7orf61Q8IZ16 206 aa33.28■■■□□ 2.92
CHCHD4-202ENST00000396914 SEPT1Q8WYJ6 367 aa33.28■■■□□ 2.92
CHCHD4-202ENST00000396914 KIF28PB7ZC32 967 aa33.28■■■□□ 2.92
CHCHD4-202ENST00000396914 PQBP1O60828 265 aaKnown RBP33.28■■■□□ 2.92
CHCHD4-202ENST00000396914 TCF7P36402 384 aaPredicted RBP33.28■■■□□ 2.92
CHCHD4-202ENST00000396914 FAM47CQ5HY64 1035 aa33.28■■■□□ 2.92
CHCHD4-202ENST00000396914 PPP4R3AQ6IN85 833 aa33.28■■■□□ 2.92
CHCHD4-202ENST00000396914 SPRYD3Q8NCJ5 442 aa33.28■■■□□ 2.92
CHCHD4-202ENST00000396914 VPS37CA5D8V6 355 aaPredicted RBP33.27■■■□□ 2.92
CHCHD4-202ENST00000396914 SLC37A4O43826 429 aa33.27■■■□□ 2.92
CHCHD4-202ENST00000396914 PPP1R13LQ8WUF5 828 aa33.27■■■□□ 2.92
CHCHD4-202ENST00000396914 NOL7Q9UMY1 257 aaKnown RBP33.27■■■□□ 2.92
CHCHD4-202ENST00000396914 DNAH12Q6ZR08 3092 aa33.26■■■□□ 2.91
CHCHD4-202ENST00000396914 ARVCFO00192 962 aa33.26■■■□□ 2.91
CHCHD4-202ENST00000396914 GAS7O60861 476 aa33.26■■■□□ 2.91
CHCHD4-202ENST00000396914 LGALS2P05162 132 aa33.26■■■□□ 2.91
CHCHD4-202ENST00000396914 LRCH2Q5VUJ6 765 aa33.26■■■□□ 2.91
CHCHD4-202ENST00000396914 GJA10Q969M2 543 aa33.26■■■□□ 2.91
CHCHD4-202ENST00000396914 MBOAT7Q96N66 472 aa33.26■■■□□ 2.91
CHCHD4-202ENST00000396914 KATNAL1Q9BW62 490 aa33.26■■■□□ 2.91
CHCHD4-202ENST00000396914 HOXD8P13378 290 aaPredicted RBP33.25■■■□□ 2.91
CHCHD4-202ENST00000396914 U2AF2P26368 475 aaKnown RBP eCLIP33.25■■■□□ 2.91
CHCHD4-202ENST00000396914 ACTR2P61160 394 aa33.25■■■□□ 2.91
CHCHD4-202ENST00000396914 NBPF20Q3BBV1 942 aa33.25■■■□□ 2.91
CHCHD4-202ENST00000396914 GSTTP1A0A1W2PQM5 241 aa33.24■■■□□ 2.91
CHCHD4-202ENST00000396914 DHX15O43143 795 aaKnown RBP33.24■■■□□ 2.91
CHCHD4-202ENST00000396914 PSEN2P49810 448 aa33.24■■■□□ 2.91
CHCHD4-202ENST00000396914 MFSD10Q14728 455 aa33.24■■■□□ 2.91
CHCHD4-202ENST00000396914 SLC5A5Q92911 643 aa33.24■■■□□ 2.91
CHCHD4-202ENST00000396914 TEKT3Q9BXF9 490 aa33.24■■■□□ 2.91
CHCHD4-202ENST00000396914 SAMM50Q9Y512 469 aa33.24■■■□□ 2.91
CHCHD4-202ENST00000396914 TLE2Q04725 743 aa33.23■■■□□ 2.91
CHCHD4-202ENST00000396914 SNX17Q15036 470 aa33.23■■■□□ 2.91
CHCHD4-202ENST00000396914 C1orf53Q5VUE5 145 aa33.23■■■□□ 2.91
CHCHD4-202ENST00000396914 TRIM50Q86XT4 487 aa33.23■■■□□ 2.91
CHCHD4-202ENST00000396914 POTEDQ86YR6 584 aa33.23■■■□□ 2.91
CHCHD4-202ENST00000396914 KAT2BQ92831 832 aa33.23■■■□□ 2.91
CHCHD4-202ENST00000396914 GLG1Q92896 1179 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms