RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 FAM13BQ9NYF5 915 aa11.13□□□□□ -0.63
DDX39B-202ENST00000396172 PCDHA7Q9UN72 937 aa11.13□□□□□ -0.63
DDX39B-202ENST00000396172 GABRQQ9UN88 632 aa11.13□□□□□ -0.63
DDX39B-202ENST00000396172 KDM3AQ9Y4C1 1321 aa11.13□□□□□ -0.63
DDX39B-202ENST00000396172 RBM47A0AV96 593 aaKnown RBP11.12□□□□□ -0.63
DDX39B-202ENST00000396172 RGS20O76081 388 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 HMGCRP04035 888 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 ARP10275 920 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 SFNP31947 248 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 JAK3P52333 1124 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 PPP2R5CQ13362 524 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 ACVR2BQ13705 512 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 IGSF22Q8N9C0 903 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 RDM1Q8NG50 284 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 NEK9Q8TD19 979 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 ZHX1Q9UKY1 873 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-202ENST00000396172 PSMD10O75832 226 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 SNAI1O95863 264 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-202ENST00000396172 MBD3O95983 291 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 KCNA2P16389 499 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 CLCN1P35523 988 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 CTCFP49711 727 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-202ENST00000396172 IQSEC1Q6DN90 963 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 ZNF746Q6NUN9 644 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-202ENST00000396172 CCDC73Q6ZRK6 1079 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 EEPD1Q7L9B9 569 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 SMAP1Q8IYB5 467 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-202ENST00000396172 MRPS27Q92552 414 aaKnown RBP11.12□□□□□ -0.63
DDX39B-202ENST00000396172 CHAMP1Q96JM3 812 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 JPH1Q9HDC5 661 aaPredicted RBP11.12□□□□□ -0.63
DDX39B-202ENST00000396172 LRWD1Q9UFC0 647 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 TSKSQ9UJT2 592 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 TRIM17Q9Y577 477 aa11.12□□□□□ -0.63
DDX39B-202ENST00000396172 ADCY3O60266 1144 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 PRPF40AO75400 957 aaKnown RBP11.11□□□□□ -0.63
DDX39B-202ENST00000396172 TXNP10599 105 aaKnown RBP11.11□□□□□ -0.63
DDX39B-202ENST00000396172 UBA1P22314 1058 aaKnown RBP11.11□□□□□ -0.63
DDX39B-202ENST00000396172 TECP42680 631 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 MRE11P49959 708 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 SEMA3FQ13275 785 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 CCL14Q16627 93 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 KRT79Q5XKE5 535 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 OTOP1Q7RTM1 612 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 TRIB2Q92519 343 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-202ENST00000396172 KATNBL1Q9H079 304 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 SLC9A2Q9UBY0 812 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 CCDC39Q9UFE4 941 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 WDR64B1ANS9 1081 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 IGHA2P01877 340 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 AKR1A1P14550 325 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 MUTP22033 750 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 CMA1P23946 247 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 UBA7P41226 1012 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 AXDND1Q5T1B0 1012 aaPredicted RBP11.11□□□□□ -0.63
DDX39B-202ENST00000396172 RESP18Q5W5W9 173 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 NCAPH2Q6IBW4 605 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 METTL7BQ6UX53 244 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 KCTD17Q8N5Z5 321 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 CALML4Q96GE6 196 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 CCDC34Q96HJ3 373 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 CSRNP2Q9H175 543 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 FLRT1Q9NZU1 646 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 DDX41Q9UJV9 622 aaKnown RBP11.11□□□□□ -0.63
DDX39B-202ENST00000396172 VAV3Q9UKW4 847 aa11.11□□□□□ -0.63
DDX39B-202ENST00000396172 DKC1O60832 514 aaKnown RBP eCLIP11.1□□□□□ -0.635e-19■■□□□ 13.7
DDX39B-202ENST00000396172 GGPS1O95749 300 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 GH1P01241 217 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 HSPA1AP0DMV8 641 aaKnown RBP11.1□□□□□ -0.63
DDX39B-202ENST00000396172 HSPA1BP0DMV9 641 aaKnown RBP11.1□□□□□ -0.63
DDX39B-202ENST00000396172 HSPA8P11142 646 aaKnown RBP11.1□□□□□ -0.63
DDX39B-202ENST00000396172 ITGB3BPQ13352 177 aaPredicted RBP11.1□□□□□ -0.63
DDX39B-202ENST00000396172 DUSP28Q4G0W2 176 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 TAPT1Q6NXT6 567 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 MIER3Q7Z3K6 550 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 RASSF8Q8NHQ8 419 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
DDX39B-202ENST00000396172 CDK5RAP3Q96JB5 506 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 CCSER1Q9C0I3 900 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 NT5C3AQ9H0P0 336 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 MLXIPQ9HAP2 919 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 LMBRD1Q9NUN5 540 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 PKD2L1Q9P0L9 805 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 FAM184BQ9ULE4 1060 aa11.1□□□□□ -0.63
DDX39B-202ENST00000396172 POTEMA6NI47 508 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 NOP56O00567 594 aaKnown RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 CYBAP13498 195 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 CYP2C19P33261 490 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 SPIRE1Q08AE8 756 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 LAMC2Q13753 1193 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 SKOR2Q2VWA4 1001 aaPredicted RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 CCDC62Q6P9F0 684 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 DHX37Q8IY37 1157 aaKnown RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 FSIP1Q8NA03 581 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 SNX29Q8TEQ0 813 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 SYMPKQ92797 1274 aaKnown RBP11.09□□□□□ -0.63
DDX39B-202ENST00000396172 CLIC6Q96NY7 704 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 GRPEL1Q9HAV7 217 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 Q9Y3F1 56 aa11.09□□□□□ -0.63
DDX39B-202ENST00000396172 FAM237AA0A1B0GTK4 181 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms