RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 H2AFXP16104 143 aaPredicted RBP10.04□□□□□ -0.8
TDP1-202ENST00000393452 HNRNPH3P31942 346 aaKnown RBP10.04□□□□□ -0.8
TDP1-202ENST00000393452 FKBP3Q00688 224 aaKnown RBP10.04□□□□□ -0.8
TDP1-202ENST00000393452 TSR1Q2NL82 804 aaKnown RBP10.04□□□□□ -0.8
TDP1-202ENST00000393452 FBXO38Q6PIJ6 1188 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 POTEGQ6S5H5 508 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 POTEEQ6S8J3 1075 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 MNS1Q8NEH6 495 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 FEZ1Q99689 392 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 SLF1Q9BQI6 1058 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 CARD6Q9BX69 1037 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 ZMYND15Q9H091 742 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 VEZTQ9HBM0 779 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 GOLGB1Q14789 3259 aaKnown RBP10.04□□□□□ -0.8
TDP1-202ENST00000393452 ATAD5Q96QE3 1844 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 WNT10BO00744 389 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 SSBP05455 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
TDP1-202ENST00000393452 BRCA1P38398 1863 aaKnown RBP10.04□□□□□ -0.8
TDP1-202ENST00000393452 MARSP56192 900 aaKnown RBP10.04□□□□□ -0.8
TDP1-202ENST00000393452 CCDC84Q86UT8 332 aaPredicted RBP10.04□□□□□ -0.8
TDP1-202ENST00000393452 FAM160B2Q86V87 743 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 ZC3H3Q8IXZ2 948 aaKnown RBP10.04□□□□□ -0.8
TDP1-202ENST00000393452 SYT2Q8N9I0 419 aaPredicted RBP10.04□□□□□ -0.8
TDP1-202ENST00000393452 CYP2W1Q8TAV3 490 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 UBXN4Q92575 508 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 CEP63Q96MT8 703 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 POLR3CQ9BUI4 534 aaPredicted RBP10.04□□□□□ -0.8
TDP1-202ENST00000393452 FGFBP2Q9BYJ0 223 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 DEFB129Q9H1M3 183 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 KCTD10Q9H3F6 313 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 SH2D4AQ9H788 454 aa10.04□□□□□ -0.8
TDP1-202ENST00000393452 RBBP6Q7Z6E9 1792 aaKnown RBP10.03□□□□□ -0.8
TDP1-202ENST00000393452 ASNSP08243 561 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 PSMC6P62333 389 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 TUBB2AQ13885 445 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 ZNF569Q5MCW4 686 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 NCAPH2Q6IBW4 605 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 RSRC2Q7L4I2 434 aaKnown RBP10.03□□□□□ -0.8
TDP1-202ENST00000393452 CCDC170Q8IYT3 715 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 SCFD1Q8WVM8 642 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 TUBB2BQ9BVA1 445 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 HAUS4Q9H6D7 363 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 PLAGL2Q9UPG8 496 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 DNM3Q9UQ16 869 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 SRCAPQ6ZRS2 3230 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 NPHP3-ACAD11A0A0J9YXS1 232 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 GCOM1H8Y6P7 765 aaPredicted RBP10.03□□□□□ -0.8
TDP1-202ENST00000393452 KIF20AO95235 890 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 POLR2MP0CAP2 368 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 TGFB2P61812 414 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 HERVK_113P62684 666 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 PPP2R3AQ06190 1150 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 GIT2Q14161 759 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 HERC4Q5GLZ8 1057 aaPredicted RBP10.03□□□□□ -0.8
TDP1-202ENST00000393452 ARHGAP27Q6ZUM4 889 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 MIGA2Q7L4E1 593 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 TBC1D5Q92609 795 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 PIM2Q9P1W9 311 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.03□□□□□ -0.8
TDP1-202ENST00000393452 FEM1BQ9UK73 627 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 MRPL11Q9Y3B7 192 aaKnown RBP10.03□□□□□ -0.8
TDP1-202ENST00000393452 COL4A3BPQ9Y5P4 624 aa10.03□□□□□ -0.8
TDP1-202ENST00000393452 EIF3CLB5ME19 914 aaKnown RBP10.02□□□□□ -0.8
TDP1-202ENST00000393452 EML1O00423 815 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 TRAF5O00463 557 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 PSMD10O75832 226 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 GNA14O95837 355 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 CFBP00751 764 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 KRT83P78385 493 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 SF3B2Q13435 895 aaKnown RBP10.02□□□□□ -0.8
TDP1-202ENST00000393452 EDRF1Q3B7T1 1238 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 NBPF9Q3BBW0 867 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 PPP4R3CPQ6ZMV5 832 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 SLC35F6Q8N357 371 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 EIF3CQ99613 913 aaKnown RBP10.02□□□□□ -0.8
TDP1-202ENST00000393452 HSD17B14Q9BPX1 270 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 WDR18Q9BV38 432 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 GLIS2Q9BZE0 524 aaPredicted RBP10.02□□□□□ -0.8
TDP1-202ENST00000393452 EMILIN3Q9NT22 766 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 ZNHIT6Q9NWK9 470 aaKnown RBP10.02□□□□□ -0.8
TDP1-202ENST00000393452 CDC23Q9UJX2 597 aa10.02□□□□□ -0.8
TDP1-202ENST00000393452 CTAGE9A4FU28 777 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 PHF20L1A8MW92 1017 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 EPHB6O15197 1021 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 CYLC1P35663 651 aaPredicted RBP10.02□□□□□ -0.81
TDP1-202ENST00000393452 ZNF76P36508 570 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 PTGER2P43116 358 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 CACNB1Q02641 598 aaPredicted RBP10.02□□□□□ -0.81
TDP1-202ENST00000393452 PABPC4Q13310 644 aaKnown RBP eCLIP10.02□□□□□ -0.81
TDP1-202ENST00000393452 PPP2R5CQ13362 524 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 CIAPIN1Q6FI81 312 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 CCDC174Q6PII3 467 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 EPM2AIP1Q7L775 607 aaPredicted RBP10.02□□□□□ -0.81
TDP1-202ENST00000393452 OTOP1Q7RTM1 612 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 TRIM59Q8IWR1 403 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 SLC5A5Q92911 643 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 EIF2AK1Q9BQI3 630 aaKnown RBP10.02□□□□□ -0.81
TDP1-202ENST00000393452 REEP2Q9BRK0 252 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 EDEM3Q9BZQ6 932 aa10.02□□□□□ -0.81
TDP1-202ENST00000393452 NHEJ1Q9H9Q4 299 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms