RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 LRRC53A6NM62 1247 aa22.56■■□□□ 1.2
TMEFF1-201ENST00000374879 IRS4O14654 1257 aaPredicted RBP22.56■■□□□ 1.2
TMEFF1-201ENST00000374879 MYBL1P10243 752 aa22.56■■□□□ 1.2
TMEFF1-201ENST00000374879 ZSCAN29Q8IWY8 852 aaPredicted RBP22.56■■□□□ 1.2
TMEFF1-201ENST00000374879 ZNF654Q8IZM8 581 aa22.56■■□□□ 1.2
TMEFF1-201ENST00000374879 VGLL2Q8N8G2 317 aa22.56■■□□□ 1.2
TMEFF1-201ENST00000374879 ELAC2Q9BQ52 826 aaKnown RBP22.56■■□□□ 1.2
TMEFF1-201ENST00000374879 NUCKS1Q9H1E3 243 aaKnown RBP22.56■■□□□ 1.2
TMEFF1-201ENST00000374879 ARHGEF10LQ9HCE6 1279 aa22.56■■□□□ 1.2
TMEFF1-201ENST00000374879 EPB41L4AQ9HCS5 686 aaPredicted RBP22.56■■□□□ 1.2
TMEFF1-201ENST00000374879 SLAIN2Q9P270 581 aa22.56■■□□□ 1.2
TMEFF1-201ENST00000374879 RTN3O95197 1032 aaPredicted RBP22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 MCM7P33993 719 aa22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 MKRN4PQ13434 485 aaPredicted RBP22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 CUL1Q13616 776 aa22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 MAEAQ7L5Y9 396 aa22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 OSBPL1AQ9BXW6 950 aa22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 PAPOLBQ9NRJ5 636 aaKnown RBP22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 TRMT112Q9UI30 125 aaKnown RBP22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 PNMA2Q9UL42 364 aa22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 SLC4A4Q9Y6R1 1079 aa22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 ASAP2O43150 1006 aa22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 CTCFP49711 727 aaPredicted RBP22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 TBC1D25Q3MII6 688 aa22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 GIMAP8Q8ND71 665 aaPredicted RBP22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 ZNF512BQ96KM6 892 aaPredicted RBP22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 STRBPQ96SI9 672 aaKnown RBP22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 RNF26Q9BY78 433 aaPredicted RBP22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 CNOT10Q9H9A5 744 aaKnown RBP22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 GGT7Q9UJ14 662 aa22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 LRP6O75581 1613 aa22.55■■□□□ 1.2
TMEFF1-201ENST00000374879 SART1O43290 800 aaKnown RBP22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 EVI5O60447 810 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 PDE8BO95263 885 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 GNAT1P11488 350 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 PHKA1P46020 1223 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 UBE3CQ15386 1083 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 ASTE1Q2TB18 679 aaPredicted RBP22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 AKNAD1Q5T1N1 836 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 LRRC34Q8IZ02 419 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 EIF1ADQ8N9N8 165 aaKnown RBP22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 TNFRSF25Q93038 417 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 CENPTQ96BT3 561 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 TSC22D3Q99576 134 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 TMEM59LQ9UK28 342 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 AFF2P51816 1311 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 CHN1P15882 459 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 NCALDP61601 193 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 PDCD2Q16342 344 aaPredicted RBP22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 MFSD6Q6ZSS7 791 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 NBPF5PQ86XG9 351 aaPredicted RBP22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 IFNL3Q8IZI9 196 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 MTFR1LQ9H019 292 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 NAPBQ9H115 298 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 MMRN2Q9H8L6 949 aa22.54■■□□□ 1.2
TMEFF1-201ENST00000374879 DPPA5A6NC42 116 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 UBOX5O94941 541 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 RARAP10276 462 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 MEI1Q5TIA1 1274 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 SIK3Q9Y2K2 1263 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 ZBTB12Q9Y330 459 aaPredicted RBP22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 ATRNO75882 1429 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 IGF2BP3O00425 579 aaKnown RBP eCLIP22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 MMEP08473 750 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 PDE6AP16499 860 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 NAALADL2Q58DX5 795 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 MFN1Q8IWA4 741 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 P2RX5Q93086 422 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 TLCD1Q96CP7 247 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 FAM210AQ96ND0 272 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 PLIN2Q99541 437 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 KRT23Q9C075 422 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 CNNM2Q9H8M5 875 aa22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 V9GY48 417 aaPredicted RBP22.53■■□□□ 1.2
TMEFF1-201ENST00000374879 RHOBTB3O94955 611 aa22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 FERP16591 822 aa22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 DRAXINQ8NBI3 349 aaPredicted RBP22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 KCNV2Q8TDN2 545 aa22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 DHTKD1Q96HY7 919 aaPredicted RBP22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 STXBP3O00186 592 aa22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 SMIM24O75264 130 aa22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 LUC7L3O95232 432 aaKnown RBP22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 MTMR3Q13615 1198 aa22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 NPY5RQ15761 445 aa22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 KIF2BQ8N4N8 673 aa22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 ECT2Q9H8V3 914 aa22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 SAMD15Q9P1V8 674 aa22.52■■□□□ 1.2
TMEFF1-201ENST00000374879 A0A0G2JS52 829 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 KRT16P08779 473 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 TAF11Q15544 211 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 STK38LQ9Y2H1 464 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 ZBTB1Q9Y2K1 713 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 THRAP3Q9Y2W1 955 aaKnown RBP22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 ATP2A2P16615 1042 aaKnown RBP22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 CCNE1P24864 410 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 KLRC1P26715 233 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 PIK3AP1Q6ZUJ8 805 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 TMC3Q7Z5M5 1100 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 FAM114A1Q8IWE2 563 aa22.51■■□□□ 1.19
TMEFF1-201ENST00000374879 STAG2Q8N3U4 1231 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms