RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 MCTP2Q6DN12 878 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 CD300LDQ6UXZ3 194 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 FAM124AQ86V42 546 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 MCF2L2Q86YR7 1114 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 FAM26EQ8N5C1 309 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 TTLL6Q8N841 843 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 BVESQ8NE79 360 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 CHST13Q8NET6 341 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 PPP1R14AQ96A00 147 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 MMP19Q99542 508 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 ZNF408Q9H9D4 720 aa6.73□□□□□ -1.33
PMS1-202ENST00000374826 MTUS2Q5JR59 1369 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 MAP3K1Q13233 1512 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 CROCC2H7BZ55 1655 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 B2RBV5 119 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 NOP56O00567 594 aaKnown RBP6.72□□□□□ -1.33
PMS1-202ENST00000374826 SGSM2O43147 1006 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 BORAQ6PGQ7 559 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 POMZP3Q6PJE2 187 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 STK32CQ86UX6 486 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 MIB1Q86YT6 1006 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 DCP2Q8IU60 420 aaKnown RBP6.72□□□□□ -1.33
PMS1-202ENST00000374826 FAM178BQ8IXR5 827 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 TXNDC5Q8NBS9 432 aaKnown RBP6.72□□□□□ -1.33
PMS1-202ENST00000374826 COPS5Q92905 334 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 GPRC5CQ9NQ84 441 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 IGSF5Q9NSI5 407 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 CLEC1BQ9P126 229 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 CDK11AQ9UQ88 783 aaPredicted RBP6.72□□□□□ -1.33
PMS1-202ENST00000374826 ZNF536O15090 1300 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 LRRC9Q6ZRR7 1453 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 NEO1Q92859 1461 aa6.72□□□□□ -1.33
PMS1-202ENST00000374826 ABCC1P33527 1531 aa6.71□□□□□ -1.33
PMS1-202ENST00000374826 SIGLEC1Q9BZZ2 1709 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 E9PSI1 815 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 DDX3XO00571 662 aaKnown RBP eCLIP6.71□□□□□ -1.347e-11■■■□□ 18.9
PMS1-202ENST00000374826 PLS3P13797 630 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 SCRN1Q12765 414 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 PRR31Q5SQ13 230 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 MBLAC2Q68D91 279 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 GLB1LQ6UWU2 654 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 TRIM59Q8IWR1 403 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 SLC43A3Q8NBI5 491 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 DVL3Q92997 716 aaPredicted RBP6.71□□□□□ -1.34
PMS1-202ENST00000374826 AP5M1Q9H0R1 490 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 MARCH2Q9P0N8 246 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 NCOA2Q15596 1464 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 SYCP2Q9BX26 1530 aa6.71□□□□□ -1.34
PMS1-202ENST00000374826 SUSD5O60279 629 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 DDAH1O94760 285 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 FXNQ16595 210 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 GTF2IRD2BQ6EKJ0 949 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 LIMS2Q7Z4I7 341 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 GTF2IRD2Q86UP8 949 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 MRGPRX3Q96LB0 322 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 LGR4Q9BXB1 951 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 SRRDQ9UH36 339 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 ADGRL1O94910 1474 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 ADGBQ8N7X0 1667 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 ARHGEF40Q8TER5 1519 aa6.7□□□□□ -1.34
PMS1-202ENST00000374826 HECW2Q9P2P5 1572 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 KIDINS220Q9ULH0 1771 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 ABCA6Q8N139 1617 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 PLCH2O75038 1416 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 C22orf46C9J442 243 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 SUV39H1O43463 412 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 ITGA1P56199 1179 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 SV2CQ496J9 727 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 ZC3H18Q86VM9 953 aaKnown RBP6.69□□□□□ -1.34
PMS1-202ENST00000374826 SEC14L1Q92503 715 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 LCORQ96JN0 433 aaPredicted RBP6.69□□□□□ -1.34
PMS1-202ENST00000374826 SORCS2Q96PQ0 1159 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 GMLQ99445 158 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 ST6GALNAC2Q9UJ37 374 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 ZMYM4Q5VZL5 1548 aa6.69□□□□□ -1.34
PMS1-202ENST00000374826 GPATCH8Q9UKJ3 1502 aaKnown RBP6.69□□□□□ -1.34
PMS1-202ENST00000374826 AKNAQ7Z591 1439 aa6.68□□□□□ -1.34
PMS1-202ENST00000374826 INF2Q27J81 1249 aa6.68□□□□□ -1.34
PMS1-202ENST00000374826 MRM1Q6IN84 353 aaKnown RBP6.68□□□□□ -1.34
PMS1-202ENST00000374826 MILR1Q7Z6M3 343 aa6.68□□□□□ -1.34
PMS1-202ENST00000374826 TEX2Q8IWB9 1127 aa6.68□□□□□ -1.34
PMS1-202ENST00000374826 MICAL1Q8TDZ2 1067 aa6.68□□□□□ -1.34
PMS1-202ENST00000374826 HNRNPLLQ8WVV9 542 aaKnown RBP6.68□□□□□ -1.34
PMS1-202ENST00000374826 NKX2-4Q9H2Z4 354 aa6.68□□□□□ -1.34
PMS1-202ENST00000374826 BTG4Q9NY30 223 aa6.68□□□□□ -1.34
PMS1-202ENST00000374826 LRP2BPQ9P2M1 347 aa6.68□□□□□ -1.34
PMS1-202ENST00000374826 R3HCC1Q9Y3T6 440 aaKnown RBP6.68□□□□□ -1.34
PMS1-202ENST00000374826 KDM5CP41229 1560 aa6.68□□□□□ -1.34
PMS1-202ENST00000374826 PTPN23Q9H3S7 1636 aa6.68□□□□□ -1.34
PMS1-202ENST00000374826 CAMSAP2Q08AD1 1489 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 FER1L4A9Z1Z3 1794 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 INO80Q9ULG1 1556 aaPredicted RBP6.67□□□□□ -1.34
PMS1-202ENST00000374826 C9orf118A6NHY6 69 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 GJB6O95452 261 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 THBDP07204 575 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 SLC6A11P48066 632 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 SURF1Q15526 300 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 SPRED1Q7Z699 444 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 ZNF227Q86WZ6 799 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 SH3RF3Q8TEJ3 882 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms