RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ZNF70Q9UC06 446 aaPredicted RBP20.77■□□□□ 0.92
USP49-202ENST00000373010 HERC5Q9UII4 1024 aaKnown RBP20.77■□□□□ 0.92
USP49-202ENST00000373010 EIF3CLB5ME19 914 aaKnown RBP20.77■□□□□ 0.92
USP49-202ENST00000373010 PSMD14O00487 310 aa20.77■□□□□ 0.92
USP49-202ENST00000373010 FKBP3Q00688 224 aaKnown RBP20.77■□□□□ 0.92
USP49-202ENST00000373010 AMPD2Q01433 879 aa20.77■□□□□ 0.92
USP49-202ENST00000373010 CCDC170Q8IYT3 715 aa20.77■□□□□ 0.92
USP49-202ENST00000373010 EIF3CQ99613 913 aaKnown RBP20.77■□□□□ 0.92
USP49-202ENST00000373010 ZBTB12Q9Y330 459 aaPredicted RBP20.77■□□□□ 0.92
USP49-202ENST00000373010 ENC1O14682 589 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 MSH4O15457 936 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 SPATA31C1P0DKV0 1188 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 TUBB2AQ13885 445 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 HAUS3Q68CZ6 603 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 MCTP2Q6DN12 878 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 TUBB2BQ9BVA1 445 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 COL4A3BPQ9Y5P4 624 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 TBX3O15119 743 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 PABPC4Q13310 644 aaKnown RBP eCLIP20.76■□□□□ 0.91
USP49-202ENST00000373010 CCDC40Q4G0X9 1142 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 FAM83BQ5T0W9 1011 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 KRT26Q7Z3Y9 468 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 CDAN1Q8IWY9 1227 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 SMCR8Q8TEV9 937 aaPredicted RBP20.76■□□□□ 0.91
USP49-202ENST00000373010 SCFD1Q8WVM8 642 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 TBC1D5Q92609 795 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 ZNF277Q9NRM2 450 aaPredicted RBP20.76■□□□□ 0.91
USP49-202ENST00000373010 HDAC6Q9UBN7 1215 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 MYO6Q9UM54 1294 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 RGPD3A6NKT7 1758 aaPredicted RBP20.76■□□□□ 0.91
USP49-202ENST00000373010 RGPD4Q7Z3J3 1758 aa20.76■□□□□ 0.91
USP49-202ENST00000373010 ZNF263O14978 683 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 STAT2P52630 851 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 CDK17Q00537 523 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 DLGAP5Q15398 846 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 FOXR2Q6PJQ5 311 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 CCDC84Q86UT8 332 aaPredicted RBP20.75■□□□□ 0.91
USP49-202ENST00000373010 ARHGEF10LQ9HCE6 1279 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 ARHGAP20Q9P2F6 1191 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 PLAGL2Q9UPG8 496 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 DUSP10Q9Y6W6 482 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 COL4A5P29400 1685 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 SLC26A4O43511 780 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 CC2D1AQ6P1N0 951 aaPredicted RBP20.75■□□□□ 0.91
USP49-202ENST00000373010 SLC30A10Q6XR72 485 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 ERMNQ8TAM6 284 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 CCDC42Q96M95 316 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 ST7Q9NRC1 585 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 EMILIN3Q9NT22 766 aa20.75■□□□□ 0.91
USP49-202ENST00000373010 CNTNAP1P78357 1384 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 IPO7O95373 1038 aaKnown RBP20.74■□□□□ 0.91
USP49-202ENST00000373010 RPA1P27694 616 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 HNRNPH3P31942 346 aaKnown RBP20.74■□□□□ 0.91
USP49-202ENST00000373010 CIITAP33076 1130 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 ZNF76P36508 570 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 CYP4A11Q02928 519 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 KCNMA1Q12791 1236 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 WHAMMP3Q1A5X7 153 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 CCDC174Q6PII3 467 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 RRAGAQ7L523 313 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 LARGE2Q8N3Y3 721 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 FAM151AQ8WW52 585 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 IQCDQ96DY2 449 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 FAM20AQ96MK3 541 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 CAMKK2Q96RR4 588 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 GMLQ99445 158 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 ANKZF1Q9H8Y5 726 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 VEZTQ9HBM0 779 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 FRMD3A2A2Y4 597 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 LRRC53A6NM62 1247 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 KRT86O43790 486 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 ATP1A1P05023 1023 aaKnown RBP20.74■□□□□ 0.91
USP49-202ENST00000373010 CASP5P51878 434 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 GIT2Q14161 759 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 ZYXQ15942 572 aaKnown RBP20.74■□□□□ 0.91
USP49-202ENST00000373010 TTLL6Q8N841 843 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 KCTD10Q9H3F6 313 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 VAV3Q9UKW4 847 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 ZBTB21Q9ULJ3 1066 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 DNM3Q9UQ16 869 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 TMX2Q9Y320 296 aa20.74■□□□□ 0.91
USP49-202ENST00000373010 SAMD1Q6SPF0 538 aaPredicted RBP20.73■□□□□ 0.91
USP49-202ENST00000373010 ZNF662Q6ZS27 426 aa20.73■□□□□ 0.91
USP49-202ENST00000373010 BAP1Q92560 729 aa20.73■□□□□ 0.91
USP49-202ENST00000373010 CFBP00751 764 aa20.73■□□□□ 0.91
USP49-202ENST00000373010 VIL1P09327 827 aaKnown RBP20.73■□□□□ 0.91
USP49-202ENST00000373010 EIF4A3P38919 411 aaKnown RBP20.73■□□□□ 0.91
USP49-202ENST00000373010 MIGA2Q7L4E1 593 aa20.73■□□□□ 0.91
USP49-202ENST00000373010 PITPNM2Q9BZ72 1349 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 EML1O00423 815 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 TRAPPC11Q7Z392 1133 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 SYT2Q8N9I0 419 aaPredicted RBP20.72■□□□□ 0.91
USP49-202ENST00000373010 NEK11Q8NG66 645 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 CEP63Q96MT8 703 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 REEP2Q9BRK0 252 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 TMEM39BQ9GZU3 492 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 POLD4Q9HCU8 107 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 HDAC9Q9UKV0 1011 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 MACROD2A1Z1Q3 448 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 CTAGE15A4D2H0 777 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms