RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 KLF18A0A0U1RQI7 1052 aa21.65■■□□□ 1.06
TMEM53-201ENST00000372235 NAPAP54920 295 aa21.65■■□□□ 1.06
TMEM53-201ENST00000372235 MTMR1Q13613 665 aa21.65■■□□□ 1.06
TMEM53-201ENST00000372235 ADCK5Q3MIX3 580 aa21.65■■□□□ 1.06
TMEM53-201ENST00000372235 CNKSR3Q6P9H4 555 aa21.65■■□□□ 1.06
TMEM53-201ENST00000372235 FBXL16Q8N461 479 aa21.65■■□□□ 1.06
TMEM53-201ENST00000372235 GPKOWQ92917 476 aaPredicted RBP eCLIP21.65■■□□□ 1.06
TMEM53-201ENST00000372235 TNPO1Q92973 898 aaKnown RBP21.65■■□□□ 1.06
TMEM53-201ENST00000372235 RIC8AQ9NPQ8 531 aa21.65■■□□□ 1.06
TMEM53-201ENST00000372235 PCDHA6Q9UN73 950 aa21.65■■□□□ 1.06
TMEM53-201ENST00000372235 PCDHA8Q9Y5H6 950 aa21.65■■□□□ 1.06
TMEM53-201ENST00000372235 TANC1Q9C0D5 1861 aa21.64■■□□□ 1.06
TMEM53-201ENST00000372235 CNTNAP5Q8WYK1 1306 aa21.64■■□□□ 1.05
TMEM53-201ENST00000372235 ABHD14A-ACY1A0A1B0GW23 586 aa21.64■■□□□ 1.05
TMEM53-201ENST00000372235 CXCL10P02778 98 aa21.64■■□□□ 1.05
TMEM53-201ENST00000372235 PPP2R2DQ66LE6 453 aa21.64■■□□□ 1.05
TMEM53-201ENST00000372235 SERINC5Q86VE9 423 aa21.64■■□□□ 1.05
TMEM53-201ENST00000372235 SKAP1Q86WV1 359 aa21.64■■□□□ 1.05
TMEM53-201ENST00000372235 RAB11FIP4Q86YS3 637 aa21.64■■□□□ 1.05
TMEM53-201ENST00000372235 CCDC12Q8WUD4 166 aaPredicted RBP21.64■■□□□ 1.05
TMEM53-201ENST00000372235 PPP1R13LQ8WUF5 828 aa21.64■■□□□ 1.05
TMEM53-201ENST00000372235 ATP6V0A1Q93050 837 aa21.64■■□□□ 1.05
TMEM53-201ENST00000372235 ZFP91Q96JP5 570 aaPredicted RBP21.64■■□□□ 1.05
TMEM53-201ENST00000372235 CTAGE1Q96RT6 745 aa21.64■■□□□ 1.05
TMEM53-201ENST00000372235 SORBS3O60504 671 aa21.63■■□□□ 1.05
TMEM53-201ENST00000372235 METAP2P50579 478 aaKnown RBP eCLIP21.63■■□□□ 1.05
TMEM53-201ENST00000372235 ADCY7P51828 1080 aa21.63■■□□□ 1.05
TMEM53-201ENST00000372235 SEMA3FQ13275 785 aa21.63■■□□□ 1.05
TMEM53-201ENST00000372235 AP3B2Q13367 1082 aa21.63■■□□□ 1.05
TMEM53-201ENST00000372235 VWCEQ96DN2 955 aa21.63■■□□□ 1.05
TMEM53-201ENST00000372235 NKX2-4Q9H2Z4 354 aa21.63■■□□□ 1.05
TMEM53-201ENST00000372235 JADE2Q9NQC1 790 aa21.63■■□□□ 1.05
TMEM53-201ENST00000372235 BARHL2Q9NY43 387 aa21.63■■□□□ 1.05
TMEM53-201ENST00000372235 BRPF3Q9ULD4 1205 aa21.63■■□□□ 1.05
TMEM53-201ENST00000372235 NAP1L2Q9ULW6 460 aaPredicted RBP21.63■■□□□ 1.05
TMEM53-201ENST00000372235 UBIAD1Q9Y5Z9 338 aa21.63■■□□□ 1.05
TMEM53-201ENST00000372235 V9GY48 417 aaPredicted RBP21.63■■□□□ 1.05
TMEM53-201ENST00000372235 DLL1O00548 723 aa21.62■■□□□ 1.05
TMEM53-201ENST00000372235 RPLP2P05387 115 aaKnown RBP21.62■■□□□ 1.05
TMEM53-201ENST00000372235 SMIM10L2AP0DMW4 78 aa21.62■■□□□ 1.05
TMEM53-201ENST00000372235 SMIM10L2BP0DMW5 78 aa21.62■■□□□ 1.05
TMEM53-201ENST00000372235 HOXC8P31273 242 aa21.62■■□□□ 1.05
TMEM53-201ENST00000372235 COL9A3Q14050 684 aaPredicted RBP21.62■■□□□ 1.05
TMEM53-201ENST00000372235 IKBKEQ14164 716 aa21.62■■□□□ 1.05
TMEM53-201ENST00000372235 WWC2Q6AWC2 1192 aa21.62■■□□□ 1.05
TMEM53-201ENST00000372235 SEPT1Q8WYJ6 367 aa21.62■■□□□ 1.05
TMEM53-201ENST00000372235 DHX38Q92620 1227 aaKnown RBP21.62■■□□□ 1.05
TMEM53-201ENST00000372235 TCEANC2Q96MN5 208 aa21.62■■□□□ 1.05
TMEM53-201ENST00000372235 JAKMIP1Q96N16 626 aaKnown RBP21.62■■□□□ 1.05
TMEM53-201ENST00000372235 NRCAMQ92823 1304 aa21.61■■□□□ 1.05
TMEM53-201ENST00000372235 LAMA2P24043 3122 aaKnown RBP21.61■■□□□ 1.05
TMEM53-201ENST00000372235 hCG_1642624A0A1W2PR95 340 aa21.61■■□□□ 1.05
TMEM53-201ENST00000372235 SMCO2A6NFE2 343 aa21.61■■□□□ 1.05
TMEM53-201ENST00000372235 UBE2SQ16763 222 aa21.61■■□□□ 1.05
TMEM53-201ENST00000372235 ERAP1Q9NZ08 941 aa21.61■■□□□ 1.05
TMEM53-201ENST00000372235 COL6A3P12111 3177 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 RSPH10B2B2RC85 870 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 RSPH10BP0C881 870 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 KCNA2P16389 499 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 ITGB5P18084 799 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 THPOP40225 353 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 AKAP17AQ02040 695 aaKnown RBP21.6■■□□□ 1.05
TMEM53-201ENST00000372235 FUT2Q10981 343 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 TRIM71Q2Q1W2 868 aaKnown RBP21.6■■□□□ 1.05
TMEM53-201ENST00000372235 Q6ZUG5 572 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 HERC6Q8IVU3 1022 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 RNPEPQ9H4A4 650 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 SMARCAD1Q9H4L7 1026 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 YBX2Q9Y2T7 364 aaKnown RBP21.6■■□□□ 1.05
TMEM53-201ENST00000372235 SNX14Q9Y5W7 946 aa21.6■■□□□ 1.05
TMEM53-201ENST00000372235 STXBP3O00186 592 aa21.59■■□□□ 1.05
TMEM53-201ENST00000372235 TCF7P36402 384 aaPredicted RBP21.59■■□□□ 1.05
TMEM53-201ENST00000372235 RABGGTBP53611 331 aa21.59■■□□□ 1.05
TMEM53-201ENST00000372235 PFKFB3Q16875 520 aaPredicted RBP21.59■■□□□ 1.05
TMEM53-201ENST00000372235 ZNF618Q5T7W0 954 aa21.59■■□□□ 1.05
TMEM53-201ENST00000372235 ERICH6BQ5W0A0 696 aa21.59■■□□□ 1.05
TMEM53-201ENST00000372235 BRF1Q92994 677 aa21.59■■□□□ 1.05
TMEM53-201ENST00000372235 MXRA8Q9BRK3 442 aa21.59■■□□□ 1.05
TMEM53-201ENST00000372235 SDF4Q9BRK5 362 aa21.59■■□□□ 1.05
TMEM53-201ENST00000372235 PRDM12Q9H4Q4 367 aa21.59■■□□□ 1.05
TMEM53-201ENST00000372235 NID2Q14112 1375 aa21.59■■□□□ 1.05
TMEM53-201ENST00000372235 ESYT2A0FGR8 921 aa21.58■■□□□ 1.05
TMEM53-201ENST00000372235 NBNO60934 754 aa21.58■■□□□ 1.05
TMEM53-201ENST00000372235 LGR5O75473 907 aa21.58■■□□□ 1.05
TMEM53-201ENST00000372235 RPS6KB1P23443 525 aa21.58■■□□□ 1.05
TMEM53-201ENST00000372235 GNA11P29992 359 aa21.58■■□□□ 1.05
TMEM53-201ENST00000372235 UTP14CQ5TAP6 766 aaKnown RBP21.58■■□□□ 1.05
TMEM53-201ENST00000372235 TAF2Q6P1X5 1199 aa21.58■■□□□ 1.05
TMEM53-201ENST00000372235 RSPH3Q86UC2 560 aa21.58■■□□□ 1.05
TMEM53-201ENST00000372235 ZBED2Q9BTP6 218 aa21.58■■□□□ 1.05
TMEM53-201ENST00000372235 AGXT2Q9BYV1 514 aa21.58■■□□□ 1.05
TMEM53-201ENST00000372235 AZI2Q9H6S1 392 aa21.58■■□□□ 1.05
TMEM53-201ENST00000372235 C6orf50Q9HD87 102 aa21.58■■□□□ 1.05
TMEM53-201ENST00000372235 JPH1Q9HDC5 661 aaPredicted RBP21.58■■□□□ 1.05
TMEM53-201ENST00000372235 NFASCO94856 1347 aa21.57■■□□□ 1.04
TMEM53-201ENST00000372235 SCN5AQ14524 2016 aa21.57■■□□□ 1.04
TMEM53-201ENST00000372235 TLL1O43897 1013 aa21.57■■□□□ 1.04
TMEM53-201ENST00000372235 EIF5BO60841 1220 aaKnown RBP21.57■■□□□ 1.04
TMEM53-201ENST00000372235 SCG2P13521 617 aa21.57■■□□□ 1.04
TMEM53-201ENST00000372235 ZNF76P36508 570 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms