RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 PROM2Q8N271 834 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 LRRC27Q9C0I9 530 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 PSTPIP2Q9H939 334 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 KIAA1024Q9UPX6 916 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 HYOU1Q9Y4L1 999 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 PCDHA2Q9Y5H9 948 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 EP400Q96L91 3159 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 USP17L15C9J2P7 530 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 USP17L13C9JLJ4 530 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 USP17L11C9JVI0 530 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 USP17L18D6R9N7 530 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 USP17L22D6RA61 530 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 USP17L17D6RBQ6 530 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 USP17L19D6RCP7 530 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 USP17L20D6RJB6 530 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 MMP14P50281 582 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 MRPL12P52815 198 aaKnown RBP17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 USP17L24Q0WX57 530 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 SKIDA1Q1XH10 827 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 TDRD12Q587J7 1177 aaKnown RBP17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 FAM83BQ5T0W9 1011 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 KLHDC7AQ5VTJ3 777 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 USP17L6PQ6QN14 398 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 LRRC31Q6UY01 552 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 ALS2CR12Q96Q35 445 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 MYH7BA7E2Y1 1941 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 ANKRD65E5RJM6 399 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 TCP1P17987 556 aaKnown RBP17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 PPP1R18Q6NYC8 613 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 MS4A14Q96JA4 679 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 EDEM3Q9BZQ6 932 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 FAM184BQ9ULE4 1060 aa17.17■□□□□ 0.34
CNKSR1-201ENST00000361530 LTBP4Q8N2S1 1624 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 SSU72P8A0A1W2PR75 194 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 POTEB3A0JP26 581 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 POTECB2RU33 542 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 ZBTB5O15062 677 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 RPS6KA5O75582 802 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 SCNN1DP51172 638 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 POLR2FP61218 127 aaKnown RBP17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 ITIH3Q06033 890 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 FOXR2Q6PJQ5 311 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 POTEBQ6S5H4 581 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 SND1Q7KZF4 910 aaKnown RBP eCLIP17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 GOLGA6L1Q8N7Z2 621 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 AFAP1L1Q8TED9 768 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 PLEKHA4Q9H4M7 779 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 USP40Q9NVE5 1235 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 MPHOSPH10O00566 681 aaKnown RBP17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 PLA2G4BP0C869 781 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 LSM14BQ9BX40 385 aaKnown RBP17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 CEP72Q9P209 647 aa17.16■□□□□ 0.34
CNKSR1-201ENST00000361530 HOXA10P31260 410 aaPredicted RBP17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 STAT3P40763 770 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 SHROOM1Q2M3G4 852 aaPredicted RBP17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 HYIQ5T013 277 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 HAUS3Q68CZ6 603 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 TRIM59Q8IWR1 403 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 SCFD1Q8WVM8 642 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 RBM12Q9NTZ6 932 aaKnown RBP17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 FOCADQ5VW36 1801 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 LY75O60449 1722 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 RBAK-RBAKDNI3L0D1 243 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 NAP1L1P55209 391 aaKnown RBP17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 DDR1Q08345 913 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 SEPT2Q15019 361 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 HERC4Q5GLZ8 1057 aaPredicted RBP17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 CCDC181Q5TID7 509 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 SFMBT2Q5VUG0 894 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 CCDC70Q6NSX1 233 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 NOX5Q96PH1 765 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 KCTD10Q9H3F6 313 aa17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 BMP2KQ9NSY1 1161 aaPredicted RBP17.15■□□□□ 0.34
CNKSR1-201ENST00000361530 ARID5AQ03989 594 aa17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 SLC9C1Q4G0N8 1177 aa17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 GPBP1Q86WP2 473 aa17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 ZFPM1Q8IX07 1006 aa17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 USP21Q9UK80 565 aa17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 GOLGA6BA6NDN3 693 aa17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 SERPING1P05155 500 aa17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 CYP11B2P19099 503 aa17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 NFIAQ12857 509 aa17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 ENOX2Q16206 610 aaKnown RBP17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 ARSHQ5FYA8 562 aa17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 GPATCH4Q5T3I0 446 aaKnown RBP17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 TBC1D5Q92609 795 aa17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.14■□□□□ 0.33
CNKSR1-201ENST00000361530 RAD21O60216 631 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 MED24O75448 989 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 GCFC2P16383 781 aaKnown RBP17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 DNA2P51530 1060 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 CDC42EP5Q6NZY7 148 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 CCDC65Q8IXS2 484 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 RNF10Q8N5U6 811 aaKnown RBP17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 CEP63Q96MT8 703 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 P2RX7Q99572 595 aaKnown RBP17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 NT5C3AQ9H0P0 336 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 EMILIN3Q9NT22 766 aa17.13■□□□□ 0.33
CNKSR1-201ENST00000361530 SWAP70Q9UH65 585 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms