RNA–Protein interactions for RNA: ENST00000358923.10

PDE4D-204, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-204ENST00000358923 KIAA0895Q8NCT3 520 aa19.91■□□□□ 0.78
PDE4D-204ENST00000358923 KCNMB3Q9NPA1 279 aa19.91■□□□□ 0.78
PDE4D-204ENST00000358923 ARFGEF1Q9Y6D6 1849 aa19.91■□□□□ 0.78
PDE4D-204ENST00000358923 MAP3K10Q02779 954 aa19.91■□□□□ 0.78
PDE4D-204ENST00000358923 ETNPPLQ8TBG4 499 aa19.91■□□□□ 0.78
PDE4D-204ENST00000358923 DDX12PQ92771 950 aa19.91■□□□□ 0.78
PDE4D-204ENST00000358923 ATG4CQ96DT6 458 aa19.91■□□□□ 0.78
PDE4D-204ENST00000358923 RANBP17Q9H2T7 1088 aaKnown RBP19.91■□□□□ 0.78
PDE4D-204ENST00000358923 COL2A1P02458 1487 aaPredicted RBP19.9■□□□□ 0.78
PDE4D-204ENST00000358923 ARP10275 920 aa19.9■□□□□ 0.78
PDE4D-204ENST00000358923 LMNB1P20700 586 aa19.9■□□□□ 0.78
PDE4D-204ENST00000358923 PABPC4Q13310 644 aaKnown RBP eCLIP19.9■□□□□ 0.78
PDE4D-204ENST00000358923 SV2BQ7L1I2 683 aa19.9■□□□□ 0.78
PDE4D-204ENST00000358923 LMAN1P49257 510 aa19.9■□□□□ 0.78
PDE4D-204ENST00000358923 PIGOQ8TEQ8 1089 aa19.9■□□□□ 0.78
PDE4D-204ENST00000358923 DACH1Q9UI36 760 aa19.9■□□□□ 0.78
PDE4D-204ENST00000358923 ERCC5P28715 1186 aaPredicted RBP19.89■□□□□ 0.78
PDE4D-204ENST00000358923 MAGEA9P43362 315 aa19.89■□□□□ 0.78
PDE4D-204ENST00000358923 CTTNQ14247 550 aaKnown RBP19.89■□□□□ 0.78
PDE4D-204ENST00000358923 CATSPER3Q86XQ3 398 aa19.89■□□□□ 0.78
PDE4D-204ENST00000358923 IRF2BP1Q8IU81 584 aa19.89■□□□□ 0.78
PDE4D-204ENST00000358923 SRRTQ9BXP5 876 aaKnown RBP19.89■□□□□ 0.78
PDE4D-204ENST00000358923 GCOM1H8Y6P7 765 aaPredicted RBP19.89■□□□□ 0.77
PDE4D-204ENST00000358923 POLR2MP0CAP2 368 aa19.89■□□□□ 0.77
PDE4D-204ENST00000358923 SREBF1P36956 1147 aa19.89■□□□□ 0.77
PDE4D-204ENST00000358923 CCDC91Q7Z6B0 441 aa19.89■□□□□ 0.77
PDE4D-204ENST00000358923 VSTM4Q8IW00 320 aa19.89■□□□□ 0.77
PDE4D-204ENST00000358923 ADSSL1Q8N142 457 aa19.89■□□□□ 0.77
PDE4D-204ENST00000358923 RAD54LQ92698 747 aa19.89■□□□□ 0.77
PDE4D-204ENST00000358923 EXOC1Q9NV70 894 aa19.89■□□□□ 0.77
PDE4D-204ENST00000358923 RNF225M0QZC1 329 aaPredicted RBP19.89■□□□□ 0.77
PDE4D-204ENST00000358923 CTNND1O60716 968 aaKnown RBP19.89■□□□□ 0.77
PDE4D-204ENST00000358923 SPIRE1Q08AE8 756 aa19.89■□□□□ 0.77
PDE4D-204ENST00000358923 KRT31Q15323 416 aa19.89■□□□□ 0.77
PDE4D-204ENST00000358923 ANKRD40Q6AI12 368 aa19.89■□□□□ 0.77
PDE4D-204ENST00000358923 CCAR2Q8N163 923 aaKnown RBP19.89■□□□□ 0.77
PDE4D-204ENST00000358923 LRRN4CLQ8ND94 238 aa19.89■□□□□ 0.77
PDE4D-204ENST00000358923 SFI1A8K8P3 1242 aa19.88■□□□□ 0.77
PDE4D-204ENST00000358923 PTPRAP18433 802 aa19.88■□□□□ 0.77
PDE4D-204ENST00000358923 NSMFQ6X4W1 530 aa19.88■□□□□ 0.77
PDE4D-204ENST00000358923 SLF1Q9BQI6 1058 aa19.88■□□□□ 0.77
PDE4D-204ENST00000358923 USP11P51784 963 aa19.88■□□□□ 0.77
PDE4D-204ENST00000358923 IKZF4Q9H2S9 585 aa19.88■□□□□ 0.77
PDE4D-204ENST00000358923 L2HGDHQ9H9P8 463 aa19.88■□□□□ 0.77
PDE4D-204ENST00000358923 FEM1BQ9UK73 627 aa19.88■□□□□ 0.77
PDE4D-204ENST00000358923 EIF2AK2P19525 551 aaKnown RBP19.87■□□□□ 0.77
PDE4D-204ENST00000358923 SFPQP23246 707 aaKnown RBP eCLIP19.87■□□□□ 0.77
PDE4D-204ENST00000358923 UBXN4Q92575 508 aa19.87■□□□□ 0.77
PDE4D-204ENST00000358923 TRIM47Q96LD4 638 aa19.87■□□□□ 0.77
PDE4D-204ENST00000358923 LTBP3Q9NS15 1303 aa19.87■□□□□ 0.77
PDE4D-204ENST00000358923 PDIA5Q14554 519 aa19.87■□□□□ 0.77
PDE4D-204ENST00000358923 CDKAL1Q5VV42 579 aa19.87■□□□□ 0.77
PDE4D-204ENST00000358923 GIMAP8Q8ND71 665 aaPredicted RBP19.87■□□□□ 0.77
PDE4D-204ENST00000358923 CXorf56Q9H5V9 222 aa19.87■□□□□ 0.77
PDE4D-204ENST00000358923 BMP2KQ9NSY1 1161 aaPredicted RBP19.87■□□□□ 0.77
PDE4D-204ENST00000358923 IGLV3-22A0A075B6J6 115 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 RHOBTB3O94955 611 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 AP3B2Q13367 1082 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 SMC1AQ14683 1233 aaKnown RBP19.86■□□□□ 0.77
PDE4D-204ENST00000358923 NELFCDQ8IXH7 590 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 FAM177A1Q8N128 213 aaPredicted RBP19.86■□□□□ 0.77
PDE4D-204ENST00000358923 PRPF38AQ8NAV1 312 aaKnown RBP19.86■□□□□ 0.77
PDE4D-204ENST00000358923 WDR11Q9BZH6 1224 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 SEC31AO94979 1220 aaKnown RBP19.86■□□□□ 0.77
PDE4D-204ENST00000358923 SPATA31C1P0DKV0 1188 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 PLS1Q14651 629 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 NR1I3Q14994 352 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 LEKR1Q6ZMV7 388 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 GPC2Q8N158 579 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 RAB34Q9BZG1 259 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 PICK1Q9NRD5 415 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 RSPH10B2B2RC85 870 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 KCNJ18B7U540 433 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 RSPH10BP0C881 870 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 ACTN2P35609 894 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 KCNJ12Q14500 433 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 MTF1Q14872 753 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 C9orf131Q5VYM1 1079 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 CLEC4DQ8WXI8 215 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 SEMA6BQ9H3T3 888 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 SH2D4AQ9H788 454 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 DONSONQ9NYP3 566 aa19.86■□□□□ 0.77
PDE4D-204ENST00000358923 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.86■□□□□ 0.77
PDE4D-204ENST00000358923 N4BP3O15049 544 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 ATP8B1O43520 1251 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 IVLP07476 585 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 KLK7P49862 253 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 TMEM119Q4V9L6 283 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 TPH2Q8IWU9 490 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 EXOC4Q96A65 974 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 TAAR1Q96RJ0 339 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 DUSP9Q99956 384 aaKnown RBP19.85■□□□□ 0.77
PDE4D-204ENST00000358923 C7orf25Q9BPX7 421 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 UBXN6Q9BZV1 441 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 KIAA1683Q9H0B3 1180 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 R3HDMLQ9H3Y0 253 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 WRAP73Q9P2S5 460 aaPredicted RBP19.85■□□□□ 0.77
PDE4D-204ENST00000358923 ADD3Q9UEY8 706 aaKnown RBP19.85■□□□□ 0.77
PDE4D-204ENST00000358923 RWDD2AQ9UIY3 292 aa19.85■□□□□ 0.77
PDE4D-204ENST00000358923 TELO2Q9Y4R8 837 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms