RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 LRCH2Q5VUJ6 765 aa28.69■■■□□ 2.18
SSBP3-202ENST00000357475 CLEC17AQ6ZS10 378 aa28.69■■■□□ 2.18
SSBP3-202ENST00000357475 CDHR1Q96JP9 859 aa28.69■■■□□ 2.18
SSBP3-202ENST00000357475 CLIC6Q96NY7 704 aa28.69■■■□□ 2.18
SSBP3-202ENST00000357475 TTC12Q9H892 705 aaPredicted RBP28.69■■■□□ 2.18
SSBP3-202ENST00000357475 POTEFA5A3E0 1075 aa28.68■■■□□ 2.18
SSBP3-202ENST00000357475 BMP15O95972 392 aa28.68■■■□□ 2.18
SSBP3-202ENST00000357475 TECP42680 631 aa28.68■■■□□ 2.18
SSBP3-202ENST00000357475 CYFIP1Q7L576 1253 aa28.68■■■□□ 2.18
SSBP3-202ENST00000357475 VWA3AA6NCI4 1184 aa28.67■■■□□ 2.18
SSBP3-202ENST00000357475 LAD1O00515 517 aa28.67■■■□□ 2.18
SSBP3-202ENST00000357475 TGFB3P10600 412 aa28.67■■■□□ 2.18
SSBP3-202ENST00000357475 PRPHP41219 470 aa28.67■■■□□ 2.18
SSBP3-202ENST00000357475 SPIRE1Q08AE8 756 aa28.67■■■□□ 2.18
SSBP3-202ENST00000357475 SCAND2PQ9GZW5 306 aaPredicted RBP28.67■■■□□ 2.18
SSBP3-202ENST00000357475 POTEMA6NI47 508 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 GAS7O60861 476 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 GGPS1O95749 300 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 CCNE2O96020 404 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 CNGA1P29973 690 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 TNFAIP2Q03169 654 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 IQSEC1Q6DN90 963 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 SLFN12Q8IYM2 578 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 RIT2Q99578 217 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 UNC45AQ9H3U1 944 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 NRBP1Q9UHY1 535 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 PCDHA7Q9UN72 937 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 PCDHA12Q9UN75 941 aa28.66■■■□□ 2.18
SSBP3-202ENST00000357475 CHMP2AO43633 222 aa28.65■■■□□ 2.18
SSBP3-202ENST00000357475 PPP6R2O75170 966 aa28.65■■■□□ 2.18
SSBP3-202ENST00000357475 FARP2O94887 1054 aaPredicted RBP28.65■■■□□ 2.18
SSBP3-202ENST00000357475 SP4Q02446 784 aa28.65■■■□□ 2.18
SSBP3-202ENST00000357475 TPRNQ4KMQ1 711 aa28.65■■■□□ 2.18
SSBP3-202ENST00000357475 SPECC1Q5M775 1068 aa28.65■■■□□ 2.18
SSBP3-202ENST00000357475 ARL6IP4Q66PJ3 421 aaKnown RBP28.65■■■□□ 2.18
SSBP3-202ENST00000357475 KCNV1Q6PIU1 500 aa28.65■■■□□ 2.18
SSBP3-202ENST00000357475 DTHD1Q6ZMT9 781 aa28.65■■■□□ 2.18
SSBP3-202ENST00000357475 KCNG4Q8TDN1 519 aa28.65■■■□□ 2.18
SSBP3-202ENST00000357475 SENP7Q9BQF6 1050 aa28.65■■■□□ 2.18
SSBP3-202ENST00000357475 SRPRBQ9Y5M8 271 aaKnown RBP28.65■■■□□ 2.18
SSBP3-202ENST00000357475 MORC2Q9Y6X9 1032 aaPredicted RBP28.65■■■□□ 2.18
SSBP3-202ENST00000357475 NFASCO94856 1347 aa28.65■■■□□ 2.18
SSBP3-202ENST00000357475 WDR81Q562E7 1941 aa28.65■■■□□ 2.18
SSBP3-202ENST00000357475 PP2D1A8MPX8 630 aa28.64■■■□□ 2.18
SSBP3-202ENST00000357475 ME1P48163 572 aa28.64■■■□□ 2.18
SSBP3-202ENST00000357475 IRX5P78411 483 aaPredicted RBP28.64■■■□□ 2.18
SSBP3-202ENST00000357475 ARHGAP1Q07960 439 aa28.64■■■□□ 2.18
SSBP3-202ENST00000357475 DUSP28Q4G0W2 176 aa28.64■■■□□ 2.18
SSBP3-202ENST00000357475 CELF3Q5SZQ8 465 aaKnown RBP28.64■■■□□ 2.18
SSBP3-202ENST00000357475 B3GNT9Q6UX72 402 aa28.64■■■□□ 2.18
SSBP3-202ENST00000357475 SDF4Q9BRK5 362 aa28.64■■■□□ 2.18
SSBP3-202ENST00000357475 TEKT3Q9BXF9 490 aa28.64■■■□□ 2.18
SSBP3-202ENST00000357475 FAM184BQ9ULE4 1060 aa28.64■■■□□ 2.18
SSBP3-202ENST00000357475 GNEQ9Y223 722 aaKnown RBP28.64■■■□□ 2.18
SSBP3-202ENST00000357475 EML1O00423 815 aa28.64■■■□□ 2.17
SSBP3-202ENST00000357475 MYCP01106 439 aaPredicted RBP28.64■■■□□ 2.17
SSBP3-202ENST00000357475 SLC9C1Q4G0N8 1177 aa28.64■■■□□ 2.17
SSBP3-202ENST00000357475 AXDND1Q5T1B0 1012 aaPredicted RBP28.64■■■□□ 2.17
SSBP3-202ENST00000357475 FBXO46Q6PJ61 603 aaPredicted RBP28.64■■■□□ 2.17
SSBP3-202ENST00000357475 KRI1Q8N9T8 703 aaKnown RBP28.64■■■□□ 2.17
SSBP3-202ENST00000357475 CSRNP2Q9H175 543 aa28.64■■■□□ 2.17
SSBP3-202ENST00000357475 TBC1D22BQ9NU19 505 aa28.64■■■□□ 2.17
SSBP3-202ENST00000357475 AKR1A1P14550 325 aa28.63■■■□□ 2.17
SSBP3-202ENST00000357475 CDC25AP30304 524 aa28.63■■■□□ 2.17
SSBP3-202ENST00000357475 FXR2P51116 673 aaKnown RBP eCLIP28.63■■■□□ 2.178e-6■■■■□ 21.8
SSBP3-202ENST00000357475 NEDD9Q14511 834 aa28.63■■■□□ 2.17
SSBP3-202ENST00000357475 JPH1Q9HDC5 661 aaPredicted RBP28.63■■■□□ 2.17
SSBP3-202ENST00000357475 PRDM10Q9NQV6 1147 aa28.63■■■□□ 2.17
SSBP3-202ENST00000357475 FRMPD3Q5JV73 1810 aa28.63■■■□□ 2.17
SSBP3-202ENST00000357475 SEPT4O43236 478 aa28.62■■■□□ 2.17
SSBP3-202ENST00000357475 NCAPH2Q6IBW4 605 aa28.62■■■□□ 2.17
SSBP3-202ENST00000357475 USP49Q70CQ1 688 aa28.62■■■□□ 2.17
SSBP3-202ENST00000357475 DHX37Q8IY37 1157 aaKnown RBP28.62■■■□□ 2.17
SSBP3-202ENST00000357475 FERMT2Q96AC1 680 aa28.62■■■□□ 2.17
SSBP3-202ENST00000357475 SLC9A2Q9UBY0 812 aa28.62■■■□□ 2.17
SSBP3-202ENST00000357475 PPP2R5CQ13362 524 aa28.61■■■□□ 2.17
SSBP3-202ENST00000357475 HSDL1Q3SXM5 330 aa28.61■■■□□ 2.17
SSBP3-202ENST00000357475 METTL7BQ6UX53 244 aa28.61■■■□□ 2.17
SSBP3-202ENST00000357475 IGSF22Q8N9C0 903 aa28.61■■■□□ 2.17
SSBP3-202ENST00000357475 MLXIPQ9HAP2 919 aa28.61■■■□□ 2.17
SSBP3-202ENST00000357475 GADD45BO75293 160 aaPredicted RBP28.6■■■□□ 2.17
SSBP3-202ENST00000357475 GH1P01241 217 aa28.6■■■□□ 2.17
SSBP3-202ENST00000357475 MTFR1Q15390 333 aa28.6■■■□□ 2.17
SSBP3-202ENST00000357475 GBP4Q96PP9 640 aa28.6■■■□□ 2.17
SSBP3-202ENST00000357475 UNC93B1Q9H1C4 597 aa28.6■■■□□ 2.17
SSBP3-202ENST00000357475 ELP1O95163 1332 aa28.6■■■□□ 2.17
SSBP3-202ENST00000357475 DYNC1LI2O43237 492 aaPredicted RBP28.59■■■□□ 2.17
SSBP3-202ENST00000357475 TMEM266Q2M3C6 531 aa28.59■■■□□ 2.17
SSBP3-202ENST00000357475 SHC4Q6S5L8 630 aa28.59■■■□□ 2.17
SSBP3-202ENST00000357475 TLK2Q86UE8 772 aa28.59■■■□□ 2.17
SSBP3-202ENST00000357475 TMEM87AQ8NBN3 555 aa28.59■■■□□ 2.17
SSBP3-202ENST00000357475 OR6J1Q8NGC5 347 aa28.59■■■□□ 2.17
SSBP3-202ENST00000357475 SPATA33Q96N06 139 aa28.59■■■□□ 2.17
SSBP3-202ENST00000357475 ACTR2P61160 394 aa28.59■■■□□ 2.17
SSBP3-202ENST00000357475 GIMAP8Q8ND71 665 aaPredicted RBP28.59■■■□□ 2.17
SSBP3-202ENST00000357475 AFG1LQ8WV93 481 aa28.59■■■□□ 2.17
SSBP3-202ENST00000357475 EPSTI1Q96J88 318 aa28.59■■■□□ 2.17
SSBP3-202ENST00000357475 HMX1Q9NP08 348 aaPredicted RBP28.59■■■□□ 2.17
SSBP3-202ENST00000357475 GSTTP1A0A1W2PQM5 241 aa28.58■■■□□ 2.17
SSBP3-202ENST00000357475 CUTAO60888 179 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms