RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 TRPA1O75762 1119 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 ACTN1P12814 892 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 SAT1P21673 171 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 DNAJC24Q6P3W2 148 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 C8orf37Q96NL8 207 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 MMS19Q96T76 1030 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 FTOQ9C0B1 505 aaKnown RBP eCLIP7.04□□□□□ -1.28
TTC3-201ENST00000354749 FRMPD2Q68DX3 1309 aaPredicted RBP7.04□□□□□ -1.28
TTC3-201ENST00000354749 GRID2IPA4D2P6 1211 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 PRPF3O43395 683 aaKnown RBP7.04□□□□□ -1.28
TTC3-201ENST00000354749 TBC1D1Q86TI0 1168 aaPredicted RBP7.04□□□□□ -1.28
TTC3-201ENST00000354749 FBXO11Q86XK2 927 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 PAGE5Q96GU1 130 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 UPF3AQ9H1J1 476 aaKnown RBP7.04□□□□□ -1.28
TTC3-201ENST00000354749 TMEM206Q9H813 350 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 FAM170AA1A519 330 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 GOLGA8HP0CJ92 632 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 LIFRP42702 1097 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 CENPUQ71F23 418 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 GRAMD1CQ8IYS0 662 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 ZBTB38Q8NAP3 1195 aaPredicted RBP7.04□□□□□ -1.28
TTC3-201ENST00000354749 SDR42E1Q8WUS8 393 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 ACCSQ96QU6 501 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 PLEKHF1Q96S99 279 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 TRIM55Q9BYV6 548 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 NUB1Q9Y5A7 615 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 SRPRBQ9Y5M8 271 aaKnown RBP7.04□□□□□ -1.28
TTC3-201ENST00000354749 A1BGP04217 495 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 ESRRAP11474 423 aaPredicted RBP7.04□□□□□ -1.28
TTC3-201ENST00000354749 ATP1A3P13637 1013 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 GGCXP38435 758 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 CYP27A1Q02318 531 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 KRT39Q6A163 491 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 ZNF449Q6P9G9 518 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 UNC5CLQ8IV45 518 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 PIP4K2CQ8TBX8 421 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 MED10Q9BTT4 135 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 USP40Q9NVE5 1235 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 PCDHB4Q9Y5E5 795 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 ERVK-7P63135 1459 aa7.04□□□□□ -1.28
TTC3-201ENST00000354749 PLEKHG3A1L390 1219 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 PLS3P13797 630 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 MDM2Q00987 491 aaPredicted RBP7.03□□□□□ -1.28
TTC3-201ENST00000354749 CAV1Q03135 178 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 PDCLQ13371 301 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 FAM160B1Q5W0V3 765 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 DNAJC10Q8IXB1 793 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 MAGI2Q86UL8 1455 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 TMEM232C9JQI7 657 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 EEF1DP29692 281 aaKnown RBP7.03□□□□□ -1.28
TTC3-201ENST00000354749 CASP2P42575 452 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 POLGP54098 1239 aaPredicted RBP7.03□□□□□ -1.28
TTC3-201ENST00000354749 METTL13Q8N6R0 699 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 PDLIM2Q96JY6 352 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.03□□□□□ -1.28
TTC3-201ENST00000354749 TARSL2A2RTX5 802 aaKnown RBP7.03□□□□□ -1.28
TTC3-201ENST00000354749 GNGT2O14610 69 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 TOM1L1O75674 476 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 CXCR5P32302 372 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 BCAMP50895 628 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 RWDD2BP57060 319 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 SPOPLQ6IQ16 392 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 KIFC3Q9BVG8 833 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 BTG4Q9NY30 223 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 PODXLO00592 558 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 OATP04181 439 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 CHGBP05060 677 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 ATP2B4P23634 1241 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 BTDP43251 543 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 BASP1P80723 227 aaKnown RBP7.03□□□□□ -1.28
TTC3-201ENST00000354749 NUGGCQ68CJ6 796 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 LRRC47Q8N1G4 583 aaKnown RBP7.03□□□□□ -1.28
TTC3-201ENST00000354749 SAAL1Q96ER3 474 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 OLFM3Q96PB7 478 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 SH3GLB2Q9NR46 395 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 ESYT2A0FGR8 921 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 PALM3A6NDB9 673 aaPredicted RBP7.03□□□□□ -1.28
TTC3-201ENST00000354749 GFPT2O94808 682 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 TMOD1P28289 359 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 TCP10Q12799 353 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 PABPC4Q13310 644 aaKnown RBP eCLIP7.03□□□□□ -1.28
TTC3-201ENST00000354749 CEP72Q9P209 647 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 TBK1Q9UHD2 729 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 GSTA4O15217 222 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 ACSL3O95573 720 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 MXI1P50539 228 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 CYP4A11Q02928 519 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 ITKQ08881 620 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 MKRN3Q13064 507 aaKnown RBP7.03□□□□□ -1.28
TTC3-201ENST00000354749 GRAMD1BQ3KR37 738 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 MCUQ8NE86 351 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 EEF2KMTQ96G04 330 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 TTC25Q96NG3 672 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 PLEKHG1Q9ULL1 1385 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 CDK12Q9NYV4 1490 aaPredicted RBP7.03□□□□□ -1.28
TTC3-201ENST00000354749 LGALS16A8MUM7 142 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 LRRN2O75325 713 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 KRT38O76015 456 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 DRP2Q13474 957 aa7.03□□□□□ -1.28
TTC3-201ENST00000354749 SPARCL1Q14515 664 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms