RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 PPFIA3O75145 1194 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 VAMP4O75379 141 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 UQCRFS1P1P0C7P4 283 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 AKR1B1P15121 316 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 CYP7A1P22680 504 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 KCNC3Q14003 757 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 PRR23CQ6ZRP0 262 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 MORC4Q8TE76 937 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 ACSF2Q96CM8 615 aaPredicted RBP10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 ADAM33Q9BZ11 813 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 ADAM7Q9H2U9 754 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 RNF146Q9NTX7 359 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 SWAP70Q9UH65 585 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 CA14Q9ULX7 337 aa10.8□□□□□ -0.68
UBE2D3-205ENST00000350435 DENND4AQ7Z401 1863 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 GDF9O60383 454 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 IGSF3O75054 1194 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 CSTF1Q05048 431 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 UBE3AQ05086 875 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 PDE12Q6L8Q7 609 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 PHLDB3Q6NSJ2 640 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 PDZD3Q86UT5 571 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 LRRC47Q8N1G4 583 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 ZBTB44Q8NCP5 570 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 RASGRP4Q8TDF6 673 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 COPS5Q92905 334 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 ZNF689Q96CS4 500 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 ALG1Q9BT22 464 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 TMEM121BQ9BXQ6 578 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 SEMA4GQ9NTN9 838 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 SPATA6Q9NWH7 488 aaPredicted RBP10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 ZSCAN32Q9NX65 697 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 MRPL42Q9Y6G3 142 aaKnown RBP10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 TENM4Q6N022 2769 aa10.79□□□□□ -0.68
UBE2D3-205ENST00000350435 USP9XQ93008 2570 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 FOXD2O60548 495 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 LILRB5O75023 590 aa10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 EOMESO95936 686 aa10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 XRRA1Q6P2D8 792 aa10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 DHX37Q8IY37 1157 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 GLIS3Q8NEA6 775 aa10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 CASP10Q92851 521 aa10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 CCDC17Q96LX7 622 aa10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 KATNAL1Q9BW62 490 aa10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 KANSL2Q9H9L4 492 aa10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 SNRKQ9NRH2 765 aa10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 PA2G4Q9UQ80 394 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 TTC3P53804 2025 aa10.78□□□□□ -0.68
UBE2D3-205ENST00000350435 NARSO43776 548 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 CYP2E1P05181 493 aaPredicted RBP10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 CASTP20810 708 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 C19orf57Q0VDD7 668 aa10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 TFCP2Q12800 502 aa10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 LAIR1Q6GTX8 287 aa10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 CMTR2Q8IYT2 770 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 SCFD2Q8WU76 684 aa10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 KAT2BQ92831 832 aa10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 TRERF1Q96PN7 1200 aa10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 USP44Q9H0E7 712 aa10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 KCNK12Q9HB15 430 aa10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 MCM9Q9NXL9 1143 aa10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 CYP39A1Q9NYL5 469 aa10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 ADD3Q9UEY8 706 aaKnown RBP10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 MYH4Q9Y623 1939 aa10.77□□□□□ -0.69
UBE2D3-205ENST00000350435 AKAP13Q12802 2813 aa10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 DGKIO75912 1065 aa10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 RETP07949 1114 aa10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 WEE2P0C1S8 567 aa10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 TXNP10599 105 aaKnown RBP10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 PSEN2P49810 448 aa10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 FOXC1Q12948 553 aa10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 CSRP2Q16527 193 aa10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 TKFCQ3LXA3 575 aa10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 ATAT1Q5SQI0 421 aa10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 AFG1LQ8WV93 481 aa10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 GATA6Q92908 595 aa10.76□□□□□ -0.69
UBE2D3-205ENST00000350435 LOC102724159A0A0B4J2E5 919 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 KCNK5O95279 499 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 FDX1P10109 184 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 ALAS1P13196 640 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 GLULP15104 373 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 ALDH5A1P51649 535 aaPredicted RBP10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 ERVFC1P60507 584 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 NONOQ15233 471 aaKnown RBP eCLIP10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 PWP2Q15269 919 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 LPAL2Q16609 132 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 PLPP4Q5VZY2 271 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 LARP1BQ659C4 914 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 KIAA1841Q6NSI8 718 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 C19orf48Q6RUI8 117 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 NSMFQ6X4W1 530 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 OTOP3Q7RTS5 596 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 PJA1Q8NG27 643 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 PIK3R5Q8WYR1 880 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 PURBQ96QR8 312 aaKnown RBP10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 GPR20Q99678 358 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 BCO2Q9BYV7 579 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 COPRSQ9NQ92 184 aa10.75□□□□□ -0.69
UBE2D3-205ENST00000350435 RXFP3Q9NSD7 469 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms