RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CFAP74Q9C0B2 1584 aa24.98■■□□□ 1.59
NPAS3-201ENST00000346562 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.98■■□□□ 1.59
NPAS3-201ENST00000346562 PUS3Q9BZE2 481 aaKnown RBP24.98■■□□□ 1.59
NPAS3-201ENST00000346562 SPECC1L-ADORA2AF8WAN1 911 aa24.98■■□□□ 1.59
NPAS3-201ENST00000346562 PSMD2Q13200 908 aa24.98■■□□□ 1.59
NPAS3-201ENST00000346562 CDC37Q16543 378 aaPredicted RBP24.98■■□□□ 1.59
NPAS3-201ENST00000346562 NXF1Q9UBU9 619 aaKnown RBP24.98■■□□□ 1.59
NPAS3-201ENST00000346562 PALD1Q9ULE6 856 aa24.98■■□□□ 1.59
NPAS3-201ENST00000346562 TRIM68Q6AZZ1 485 aa24.98■■□□□ 1.59
NPAS3-201ENST00000346562 DSTYKQ6XUX3 929 aa24.98■■□□□ 1.59
NPAS3-201ENST00000346562 CCDC124Q96CT7 223 aaKnown RBP24.98■■□□□ 1.59
NPAS3-201ENST00000346562 DAAM1Q9Y4D1 1078 aa24.98■■□□□ 1.59
NPAS3-201ENST00000346562 HEXIM2Q96MH2 286 aaKnown RBP24.97■■□□□ 1.59
NPAS3-201ENST00000346562 GCNT4Q9P109 453 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 SETSIPP0DME0 302 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 KRT33BQ14525 404 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 UBE2TQ9NPD8 197 aaPredicted RBP24.97■■□□□ 1.59
NPAS3-201ENST00000346562 MID2Q9UJV3 735 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 SLC8A1P32418 973 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 ADD2P35612 726 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 SOX5P35711 763 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 PARVGQ9HBI0 331 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 SESN3P58005 492 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 APOA5Q6Q788 366 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 KRT27Q7Z3Y8 459 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 GANCQ8TET4 914 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 LSG1Q9H089 658 aaKnown RBP24.97■■□□□ 1.59
NPAS3-201ENST00000346562 HSPA6P17066 643 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 SLC12A1Q13621 1099 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 PRPF38AQ8NAV1 312 aaKnown RBP24.97■■□□□ 1.59
NPAS3-201ENST00000346562 TCP11Q8WWU5 503 aa24.97■■□□□ 1.59
NPAS3-201ENST00000346562 INTS9Q9NV88 658 aaKnown RBP24.97■■□□□ 1.59
NPAS3-201ENST00000346562 USP17L3A6NCW0 530 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 USP17L4A6NCW7 530 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 CLIC2O15247 247 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 USP17L1Q7RTZ2 530 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 LRRC43Q8N309 656 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 TTC25Q96NG3 672 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 SNX1Q13596 522 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 RASGRP4Q8TDF6 673 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 DYNLT1P63172 113 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 CIAPIN1Q6FI81 312 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 STAG1Q8WVM7 1258 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 THEGQ9P2T0 379 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 PGRMC1O00264 195 aaKnown RBP24.96■■□□□ 1.59
NPAS3-201ENST00000346562 MYL3P08590 195 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 BASP1P80723 227 aaKnown RBP24.96■■□□□ 1.59
NPAS3-201ENST00000346562 LRRC41Q15345 812 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 SLFN12LQ6IEE8 588 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 POLR3EQ9NVU0 708 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 CSPG5O95196 566 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 NPR1P16066 1061 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 CACNB1Q02641 598 aaPredicted RBP24.96■■□□□ 1.59
NPAS3-201ENST00000346562 DHX38Q92620 1227 aaKnown RBP24.96■■□□□ 1.59
NPAS3-201ENST00000346562 MAP4K1Q92918 833 aa24.96■■□□□ 1.59
NPAS3-201ENST00000346562 RCN2Q14257 317 aa24.95■■□□□ 1.59
NPAS3-201ENST00000346562 TMED2Q15363 201 aa24.95■■□□□ 1.59
NPAS3-201ENST00000346562 SLC10A4Q96EP9 437 aa24.95■■□□□ 1.59
NPAS3-201ENST00000346562 ASAP1Q9ULH1 1129 aa24.95■■□□□ 1.59
NPAS3-201ENST00000346562 LRRN2O75325 713 aa24.95■■□□□ 1.58
NPAS3-201ENST00000346562 LUC7L3O95232 432 aaKnown RBP24.95■■□□□ 1.58
NPAS3-201ENST00000346562 ETF1P62495 437 aaKnown RBP24.95■■□□□ 1.58
NPAS3-201ENST00000346562 FKBP3Q00688 224 aaKnown RBP24.95■■□□□ 1.58
NPAS3-201ENST00000346562 TBC1D10BQ4KMP7 808 aaPredicted RBP24.95■■□□□ 1.58
NPAS3-201ENST00000346562 RSBN1LQ6PCB5 846 aaPredicted RBP24.95■■□□□ 1.58
NPAS3-201ENST00000346562 ATG3Q9NT62 314 aa24.95■■□□□ 1.58
NPAS3-201ENST00000346562 OLA1Q9NTK5 396 aaKnown RBP24.95■■□□□ 1.58
NPAS3-201ENST00000346562 DNAJC8O75937 253 aaPredicted RBP24.95■■□□□ 1.58
NPAS3-201ENST00000346562 DEPDC1BQ8WUY9 529 aa24.95■■□□□ 1.58
NPAS3-201ENST00000346562 PBKQ96KB5 322 aa24.95■■□□□ 1.58
NPAS3-201ENST00000346562 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.95■■□□□ 1.58
NPAS3-201ENST00000346562 PPP1R9AQ9ULJ8 1098 aa24.95■■□□□ 1.58
NPAS3-201ENST00000346562 PDCD2Q16342 344 aaPredicted RBP24.95■■□□□ 1.58
NPAS3-201ENST00000346562 C1orf228Q6PIY5 440 aa24.95■■□□□ 1.58
NPAS3-201ENST00000346562 BZW1Q7L1Q6 419 aaKnown RBP24.95■■□□□ 1.58
NPAS3-201ENST00000346562 DRC3Q9H069 523 aa24.95■■□□□ 1.58
NPAS3-201ENST00000346562 PHLPP2Q6ZVD8 1323 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 MEIS1O00470 390 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 THEM5Q8N1Q8 247 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 ELMOD1Q8N336 334 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 ANKRD13CQ8N6S4 541 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 PDXDC2PQ6P474 469 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 FGD4Q96M96 766 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 ZBTB1Q9Y2K1 713 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 SPOPLQ6IQ16 392 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 MSTO1Q9BUK6 570 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 CALN1Q9BXU9 219 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 RWDD2AQ9UIY3 292 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 RAD17O75943 681 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 RC3H1Q5TC82 1133 aaKnown RBP24.94■■□□□ 1.58
NPAS3-201ENST00000346562 THAP9Q9H5L6 903 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 SLC13A4Q9UKG4 626 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 MAGED2Q9UNF1 606 aaPredicted RBP24.94■■□□□ 1.58
NPAS3-201ENST00000346562 CHEK2O96017 543 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 ZSCAN26Q16670 478 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 KLC3Q6P597 504 aa24.94■■□□□ 1.58
NPAS3-201ENST00000346562 MMP1P03956 469 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 EFHD1Q9BUP0 239 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 GNAT1P11488 350 aa24.93■■□□□ 1.58
NPAS3-201ENST00000346562 MXI1P50539 228 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms