RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 SLU7O95391 586 aaKnown RBP20.69■□□□□ 0.9
HOXA9-201ENST00000343483 RPA1P27694 616 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 CYP4A11Q02928 519 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 RAD51AP2Q09MP3 1159 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 PSMD2Q13200 908 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 SCYL3Q8IZE3 742 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 CCDC94Q9BW85 323 aaPredicted RBP20.69■□□□□ 0.9
HOXA9-201ENST00000343483 HOMER2Q9NSB8 354 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 EMILIN3Q9NT22 766 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 GGA3Q9NZ52 723 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 NPHP3-ACAD11A0A0J9YXS1 232 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 NFIBO00712 420 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 KRT18P05783 430 aaKnown RBP20.69■□□□□ 0.9
HOXA9-201ENST00000343483 TPM1P09493 284 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 SPATA31C1P0DKV0 1188 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 CASP14P31944 242 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 CACNB1Q02641 598 aaPredicted RBP20.69■□□□□ 0.9
HOXA9-201ENST00000343483 EHHADHQ08426 723 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 LRRC41Q15345 812 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 CENPPQ6IPU0 288 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 GUF1Q8N442 669 aaKnown RBP20.69■□□□□ 0.9
HOXA9-201ENST00000343483 GLIS3Q8NEA6 775 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 ERO1AQ96HE7 468 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 RPAP3Q9H6T3 665 aaPredicted RBP20.69■□□□□ 0.9
HOXA9-201ENST00000343483 RAVER2Q9HCJ3 691 aaKnown RBP20.69■□□□□ 0.9
HOXA9-201ENST00000343483 PICK1Q9NRD5 415 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 DNAI1Q9UI46 699 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.69■□□□□ 0.9
HOXA9-201ENST00000343483 STK24Q9Y6E0 443 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 PHLPP2Q6ZVD8 1323 aa20.69■□□□□ 0.9
HOXA9-201ENST00000343483 LGALS16A8MUM7 142 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 GYPCP04921 128 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 ALAS1P13196 640 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 CYP11B2P19099 503 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 USP14P54578 494 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 PSMC6P62333 389 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 CEP55Q53EZ4 464 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 LRCH2Q5VUJ6 765 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 TRIM65Q6PJ69 517 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 SLC30A10Q6XR72 485 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 FAM114A1Q8IWE2 563 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 GPC2Q8N158 579 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 CNOT6LQ96LI5 555 aaKnown RBP20.68■□□□□ 0.9
HOXA9-201ENST00000343483 PANX2Q96RD6 677 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 L2HGDHQ9H9P8 463 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 DNM3Q9UQ16 869 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 CTDP1Q9Y5B0 961 aaPredicted RBP20.68■□□□□ 0.9
HOXA9-201ENST00000343483 CHMP2AO43633 222 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 MFAP3LO75121 409 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 HSD17B4P51659 736 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 SLC12A3P55017 1021 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 PABPC4Q13310 644 aaKnown RBP eCLIP20.68■□□□□ 0.9
HOXA9-201ENST00000343483 DPY19L2Q6NUT2 758 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 TOGARAM2Q6ZUX3 1019 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 CCDC65Q8IXS2 484 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 TUBGCP2Q9BSJ2 902 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 SLC38A10Q9HBR0 1119 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 TBC1D7Q9P0N9 293 aa20.68■□□□□ 0.9
HOXA9-201ENST00000343483 EML1O00423 815 aa20.67■□□□□ 0.9
HOXA9-201ENST00000343483 EPS15P42566 896 aa20.67■□□□□ 0.9
HOXA9-201ENST00000343483 GLIPR1L2Q4G1C9 344 aa20.67■□□□□ 0.9
HOXA9-201ENST00000343483 FAM26FQ5R3K3 315 aa20.67■□□□□ 0.9
HOXA9-201ENST00000343483 CNGA4Q8IV77 575 aa20.67■□□□□ 0.9
HOXA9-201ENST00000343483 EIF2AK1Q9BQI3 630 aaKnown RBP20.67■□□□□ 0.9
HOXA9-201ENST00000343483 PPP1R9AQ9ULJ8 1098 aa20.67■□□□□ 0.9
HOXA9-201ENST00000343483 ZC3H4Q9UPT8 1303 aaKnown RBP20.66■□□□□ 0.9
HOXA9-201ENST00000343483 GOLGA6L9A6NEM1 432 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 B4DLN1 442 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 PTPRAP18433 802 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 FXR1P51114 621 aaKnown RBP eCLIP20.66■□□□□ 0.9
HOXA9-201ENST00000343483 MB21D1Q8N884 522 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 CLEC4DQ8WXI8 215 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 ZHX3Q9H4I2 956 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 AS3MTQ9HBK9 375 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 RGL1Q9NZL6 768 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 ZNF112Q9UJU3 913 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 GAS7O60861 476 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 MTIF2P46199 727 aaKnown RBP20.66■□□□□ 0.9
HOXA9-201ENST00000343483 BACE1P56817 501 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 ARSHQ5FYA8 562 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 HERC4Q5GLZ8 1057 aaPredicted RBP20.66■□□□□ 0.9
HOXA9-201ENST00000343483 OTOP1Q7RTM1 612 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 MCF2L2Q86YR7 1114 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 MYOCDQ8IZQ8 938 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 ZNF280CQ8ND82 737 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 ZNF577Q9BSK1 485 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 COL20A1Q9P218 1284 aa20.66■□□□□ 0.9
HOXA9-201ENST00000343483 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.66■□□□□ 0.9
HOXA9-201ENST00000343483 V9GYY5 206 aaPredicted RBP20.66■□□□□ 0.9
HOXA9-201ENST00000343483 PSMD10O75832 226 aa20.65■□□□□ 0.9
HOXA9-201ENST00000343483 HOXA7P31268 230 aaPredicted RBP20.65■□□□□ 0.9
HOXA9-201ENST00000343483 SLC5A5Q92911 643 aa20.65■□□□□ 0.9
HOXA9-201ENST00000343483 POLR3CQ9BUI4 534 aaPredicted RBP20.65■□□□□ 0.9
HOXA9-201ENST00000343483 ZHX2Q9Y6X8 837 aa20.65■□□□□ 0.9
HOXA9-201ENST00000343483 KIF3CO14782 793 aa20.65■□□□□ 0.9
HOXA9-201ENST00000343483 ARP10275 920 aa20.65■□□□□ 0.9
HOXA9-201ENST00000343483 HIRAP54198 1017 aaPredicted RBP20.65■□□□□ 0.9
HOXA9-201ENST00000343483 SETQ01105 290 aaPredicted RBP20.65■□□□□ 0.9
HOXA9-201ENST00000343483 LRRC63Q05C16 580 aa20.65■□□□□ 0.9
HOXA9-201ENST00000343483 TRIM14Q14142 442 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms