RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 DNTTIP2Q5QJE6 756 aaKnown RBP13.87□□□□□ -0.19
ZNF548-201ENST00000336128 OTOP1Q7RTM1 612 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 CSGALNACT2Q8N6G5 542 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 REPS2Q8NFH8 660 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 TRERF1Q96PN7 1200 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 ZNF577Q9BSK1 485 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 VPS16Q9H269 839 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 SEMA6BQ9H3T3 888 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 MAP3K20Q9NYL2 800 aaKnown RBP13.87□□□□□ -0.19
ZNF548-201ENST00000336128 DNM3Q9UQ16 869 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 SNCAIPQ9Y6H5 919 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 POLR2AP24928 1970 aaKnown RBP13.87□□□□□ -0.19
ZNF548-201ENST00000336128 N4BP3O15049 544 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 CHMP2AO43633 222 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 EEF1GP26641 437 aaKnown RBP13.87□□□□□ -0.19
ZNF548-201ENST00000336128 PSMC6P62333 389 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 KRT26Q7Z3Y9 468 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 CREBRFQ8IUR6 639 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 SULF1Q8IWU6 871 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 CCDC65Q8IXS2 484 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 GUF1Q8N442 669 aaKnown RBP13.87□□□□□ -0.19
ZNF548-201ENST00000336128 CCDC112Q8NEF3 446 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 RNF146Q9NTX7 359 aa13.87□□□□□ -0.19
ZNF548-201ENST00000336128 MAGEC2Q9UBF1 373 aaPredicted RBP13.87□□□□□ -0.19
ZNF548-201ENST00000336128 COL11A1P12107 1806 aaPredicted RBP13.86□□□□□ -0.19
ZNF548-201ENST00000336128 KRT18P05783 430 aaKnown RBP13.86□□□□□ -0.19
ZNF548-201ENST00000336128 ITGB5P18084 799 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 MAP3K9P80192 1104 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 PABPC4Q13310 644 aaKnown RBP eCLIP13.86□□□□□ -0.19
ZNF548-201ENST00000336128 VGLL4Q14135 290 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 FAM26FQ5R3K3 315 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 CENPPQ6IPU0 288 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 CATSPERGQ6ZRH7 1159 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.86□□□□□ -0.19
ZNF548-201ENST00000336128 NIPA1Q7RTP0 329 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 SYT2Q8N9I0 419 aaPredicted RBP13.86□□□□□ -0.19
ZNF548-201ENST00000336128 TAAR1Q96RJ0 339 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 TEKT3Q9BXF9 490 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 WDR11Q9BZH6 1224 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 TUFT1Q9NNX1 390 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 RGL1Q9NZL6 768 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 ADAMTS5Q9UNA0 930 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 OTOFQ9HC10 1997 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 ITIH6Q6UXX5 1313 aa13.86□□□□□ -0.19
ZNF548-201ENST00000336128 BCRP11274 1271 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 OAZ1P54368 228 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 RPS6P62753 249 aaKnown RBP13.85□□□□□ -0.19
ZNF548-201ENST00000336128 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
ZNF548-201ENST00000336128 CTTNQ14247 550 aaKnown RBP13.85□□□□□ -0.19
ZNF548-201ENST00000336128 ARSHQ5FYA8 562 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 PCNX4Q63HM2 1172 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 RNF207Q6ZRF8 634 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 TC2NQ8N9U0 490 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 DYDC2Q96IM9 177 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 TMX1Q9H3N1 280 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 UNC45AQ9H3U1 944 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.85□□□□□ -0.19
ZNF548-201ENST00000336128 R3HCC1Q9Y3T6 440 aaKnown RBP13.85□□□□□ -0.19
ZNF548-201ENST00000336128 RIPK3Q9Y572 518 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 UBIAD1Q9Y5Z9 338 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 USP27XA6NNY8 438 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 IPO5O00410 1097 aaKnown RBP13.85□□□□□ -0.19
ZNF548-201ENST00000336128 EYA4O95677 639 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 EIF2AK2P19525 551 aaKnown RBP13.85□□□□□ -0.19
ZNF548-201ENST00000336128 COG2Q14746 738 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 LRRC41Q15345 812 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 SH3D19Q5HYK7 790 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 NSMFQ6X4W1 530 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 FAM114A1Q8IWE2 563 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 GLIS3Q8NEA6 775 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 HSD17B14Q9BPX1 270 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 KCND1Q9NSA2 647 aa13.85□□□□□ -0.19
ZNF548-201ENST00000336128 FRMD3A2A2Y4 597 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 LGALS16A8MUM7 142 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 KCNJ6P48051 423 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 RAD51AP2Q09MP3 1159 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 TKFCQ3LXA3 575 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 SNRNP48Q6IEG0 339 aaKnown RBP13.84□□□□□ -0.19
ZNF548-201ENST00000336128 PPFIBP1Q86W92 1011 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 TMEM139Q8IV31 216 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 MYOCDQ8IZQ8 938 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 CCAR2Q8N163 923 aaKnown RBP13.84□□□□□ -0.19
ZNF548-201ENST00000336128 KCTD17Q8N5Z5 321 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 CNOT6LQ96LI5 555 aaKnown RBP13.84□□□□□ -0.19
ZNF548-201ENST00000336128 RIT2Q99578 217 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 PCDHA2Q9Y5H9 948 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 AKR1B15C9JRZ8 316 aaPredicted RBP13.84□□□□□ -0.19
ZNF548-201ENST00000336128 ADKP55263 362 aaKnown RBP13.84□□□□□ -0.19
ZNF548-201ENST00000336128 MRPS9P82933 396 aaKnown RBP13.84□□□□□ -0.19
ZNF548-201ENST00000336128 GIT2Q14161 759 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 TMEM132BQ14DG7 1078 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 PGM5Q15124 567 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 EPHA7Q15375 998 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 B3GNT9Q6UX72 402 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 TPH2Q8IWU9 490 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 RBM46Q8TBY0 533 aaKnown RBP13.84□□□□□ -0.19
ZNF548-201ENST00000336128 FGFBP2Q9BYJ0 223 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 BHMT2Q9H2M3 363 aa13.84□□□□□ -0.19
ZNF548-201ENST00000336128 AGO4Q9HCK5 861 aaKnown RBP13.84□□□□□ -0.19
ZNF548-201ENST00000336128 JADE2Q9NQC1 790 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms