RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 HNRNPDLO14979 420 aaKnown RBP17.12■□□□□ 0.33
HDAC5-202ENST00000336057 DAPK3O43293 454 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 FDPSP14324 419 aaKnown RBP17.12■□□□□ 0.33
HDAC5-202ENST00000336057 PHBP35232 272 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 EFCAB13Q8IY85 973 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 VPS52Q8N1B4 723 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 PROM2Q8N271 834 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 ST7Q9NRC1 585 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.12■□□□□ 0.33
HDAC5-202ENST00000336057 USP17L5A8MUK1 530 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 ORC4O43929 436 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 CTDNEP1O95476 244 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 TROVE2P10155 538 aaKnown RBP eCLIP17.12■□□□□ 0.33
HDAC5-202ENST00000336057 GYS2P54840 703 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 HNRNPH2P55795 449 aaKnown RBP17.12■□□□□ 0.33
HDAC5-202ENST00000336057 IFT88Q13099 833 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 HADHQ16836 314 aaKnown RBP17.12■□□□□ 0.33
HDAC5-202ENST00000336057 TXNRD1Q16881 649 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 CC2D2BQ6DHV5 1058 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 ZNF653Q96CK0 615 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 GPR101Q96P66 508 aaPredicted RBP17.12■□□□□ 0.33
HDAC5-202ENST00000336057 TMEM206Q9H813 350 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 TUBE1Q9UJT0 475 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 TRPC6Q9Y210 931 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 CLEC11AQ9Y240 323 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 PABPN1LA6NDY0 278 aaKnown RBP17.12■□□□□ 0.33
HDAC5-202ENST00000336057 P4HA1P13674 534 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 MAN1A1P33908 653 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 PDIA6Q15084 440 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 TSNAXIP1Q2TAA8 658 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 KCNB2Q92953 911 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 DBNDD1Q9H9R9 158 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 ZNF148Q9UQR1 794 aa17.12■□□□□ 0.33
HDAC5-202ENST00000336057 RPS6KA4O75676 772 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 HSPA6P17066 643 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 ANTXR2P58335 489 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 PRKG1Q13976 671 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 BARHL2Q9NY43 387 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 CEP72Q9P209 647 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 CLTCQ00610 1675 aaKnown RBP17.11■□□□□ 0.33
HDAC5-202ENST00000336057 CTAGE3PQ8IX95 158 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 SLC44A5Q8NCS7 719 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 WDR24Q96S15 920 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 BHMT2Q9H2M3 363 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 STK38LQ9Y2H1 464 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 COL15A1P39059 1388 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 SEMA3FQ13275 785 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 ZBTB8OSQ8IWT0 167 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 KIDINS220Q9ULH0 1771 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 STAT2P52630 851 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 ORC2Q13416 577 aaPredicted RBP17.11■□□□□ 0.33
HDAC5-202ENST00000336057 GLE1Q53GS7 698 aaKnown RBP17.11■□□□□ 0.33
HDAC5-202ENST00000336057 EPC1Q9H2F5 836 aa17.11■□□□□ 0.33
HDAC5-202ENST00000336057 LRRC53A6NM62 1247 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 PAXIP1Q6ZW49 1069 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-202ENST00000336057 TRIM6Q9C030 488 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-202ENST00000336057 PCIF1Q9H4Z3 704 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 NFU1Q9UMS0 254 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 CASC4Q6P4E1 433 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 ZNF512BQ96KM6 892 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-202ENST00000336057 NARFQ9UHQ1 456 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 FRMPD1Q5SYB0 1578 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 A0A1W2PQC6 194 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 PP2D1A8MPX8 630 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 STAM2O75886 525 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 CSF1RP07333 972 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 POLGP54098 1239 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-202ENST00000336057 BFSP1Q12934 665 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 A0A087WUV0 522 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-202ENST00000336057 LRRIQ4A6NIV6 560 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 IFNAR2P48551 515 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 MTF1Q14872 753 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 CCDC197Q8NCU1 140 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 RAD54LQ92698 747 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 COA1Q9GZY4 146 aa17.1■□□□□ 0.33
HDAC5-202ENST00000336057 UBE2TQ9NPD8 197 aaPredicted RBP17.1■□□□□ 0.33
HDAC5-202ENST00000336057 A0A1B0GTH6 734 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 TADA3O75528 432 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 NR1D1P20393 614 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 POLR2BP30876 1174 aaKnown RBP17.09■□□□□ 0.33
HDAC5-202ENST00000336057 PSMC4P43686 418 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 AP3B2Q13367 1082 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 CAPN12Q6ZSI9 719 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 FAM84BQ96KN1 310 aaPredicted RBP17.09■□□□□ 0.33
HDAC5-202ENST00000336057 MLXIPQ9HAP2 919 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 CLRN2A0PK11 232 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 ZBTB5O15062 677 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 MAPK4P31152 587 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 FAM182BQ5T319 152 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 ATP6V0A1Q93050 837 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 TRIM11Q96F44 468 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 SALL3Q9BXA9 1300 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 TNNC2P02585 160 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 MAP2K2P36507 400 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 PIK3CAP42336 1068 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 FMR1Q06787 632 aaKnown RBP eCLIP17.09■□□□□ 0.331e-7■■□□□ 12.1
HDAC5-202ENST00000336057 CUL1Q13616 776 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 AP1M1Q9BXS5 423 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 ANAPC4Q9UJX5 808 aa17.09■□□□□ 0.33
HDAC5-202ENST00000336057 COL3A1P02461 1466 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms