RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 PIGOQ8TEQ8 1089 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 HBS1LQ9Y450 684 aaKnown RBP9.35□□□□□ -0.91
TDP1-201ENST00000335725 ATP9AO75110 1047 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 PSMA5P28066 241 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 TMOD1P28289 359 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 SKIV2L2P42285 1042 aaKnown RBP9.35□□□□□ -0.91
TDP1-201ENST00000335725 MTMR3Q13615 1198 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 RASA2Q15283 850 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 ARL13BQ3SXY8 428 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 WAPLQ7Z5K2 1190 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 PATL1Q86TB9 770 aaKnown RBP9.35□□□□□ -0.91
TDP1-201ENST00000335725 FNDC8Q8TC99 324 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 NSMCE3Q96MG7 304 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 ZSWIM6Q9HCJ5 1215 aa9.35□□□□□ -0.91
TDP1-201ENST00000335725 STRNO43815 780 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 RARAP10276 462 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 ZKSCAN1P17029 563 aaPredicted RBP9.34□□□□□ -0.91
TDP1-201ENST00000335725 RXRBP28702 533 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 PTDSS1P48651 473 aaKnown RBP9.34□□□□□ -0.91
TDP1-201ENST00000335725 HNRNPMP52272 730 aaKnown RBP eCLIP9.34□□□□□ -0.91
TDP1-201ENST00000335725 SYCP2LQ5T4T6 812 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 PCNX4Q63HM2 1172 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 PTF1AQ7RTS3 328 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 PASD1Q8IV76 773 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 SIX5Q8N196 739 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.34□□□□□ -0.91
TDP1-201ENST00000335725 GATA6Q92908 595 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 ZNF333Q96JL9 665 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 CAPZA3Q96KX2 299 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 FAM114A2Q9NRY5 505 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 NR2E3Q9Y5X4 410 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 CEMIPQ8WUJ3 1361 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 PHF20L1A8MW92 1017 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 UBL4AP11441 157 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 OCRLQ01968 901 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 CYP4A11Q02928 519 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 WASHC5Q12768 1159 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 E2F2Q14209 437 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 NXNQ6DKJ4 435 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 NECAB1Q8N987 351 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 UCMAQ8WVF2 138 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 XPO6Q96QU8 1125 aaKnown RBP9.34□□□□□ -0.91
TDP1-201ENST00000335725 C19orf44Q9H6X5 657 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 AOX1Q06278 1338 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 MROH7Q68CQ1 1323 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 TSPAN1O60635 241 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 CCDC6Q16204 474 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 EAPPQ56P03 285 aaPredicted RBP9.34□□□□□ -0.91
TDP1-201ENST00000335725 C6orf183Q5T699 404 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 TRIM67Q6ZTA4 783 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 MARK2Q7KZI7 788 aaKnown RBP9.34□□□□□ -0.91
TDP1-201ENST00000335725 TMC4Q7Z404 712 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 PIGWQ7Z7B1 504 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 DDHD1Q8NEL9 900 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 MAELQ96JY0 434 aaKnown RBP9.34□□□□□ -0.91
TDP1-201ENST00000335725 NUDCD1Q96RS6 583 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 PCSK1NQ9UHG2 260 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 DACH1Q9UI36 760 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 WWC3Q9ULE0 1092 aa9.34□□□□□ -0.91
TDP1-201ENST00000335725 KIAA0232Q92628 1395 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 GOLGA8CPA6NN73 597 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 ATP5HO75947 161 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 PABPC4LP0CB38 370 aaKnown RBP9.33□□□□□ -0.92
TDP1-201ENST00000335725 PHBP35232 272 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 SLC16A2P36021 539 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 CDK7P50613 346 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 RELAQ04206 551 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 PARP6Q2NL67 630 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 FAM209AQ5JX71 171 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 WASHC2DQ5SRD0 308 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 CEP85Q6P2H3 762 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 LRRC8BQ6P9F7 803 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 ZC3H18Q86VM9 953 aaKnown RBP9.33□□□□□ -0.92
TDP1-201ENST00000335725 MCF2L2Q86YR7 1114 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 PIAS4Q8N2W9 510 aaPredicted RBP9.33□□□□□ -0.92
TDP1-201ENST00000335725 STARD8Q92502 1023 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 AIDAQ96BJ3 306 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 HSD3B7Q9H2F3 369 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 DIS3Q9Y2L1 958 aaKnown RBP9.33□□□□□ -0.92
TDP1-201ENST00000335725 SHPRHQ149N8 1683 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 ADGRB2O60241 1585 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 PLEKHG1Q9ULL1 1385 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 LINC00854A0A1B0GVQ3 168 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 FBP2O00757 339 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 B3GALNT1O75752 331 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 MYL6BP14649 208 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 GALK1P51570 392 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 KIF23Q02241 960 aaPredicted RBP9.33□□□□□ -0.92
TDP1-201ENST00000335725 BNIP1Q12981 228 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 POLA2Q14181 598 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 HLTFQ14527 1009 aaKnown RBP eCLIP9.33□□□□□ -0.92
TDP1-201ENST00000335725 TWF2Q6IBS0 349 aaKnown RBP9.33□□□□□ -0.92
TDP1-201ENST00000335725 PPP1R42Q7Z4L9 355 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 SNF8Q96H20 258 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 DCLRE1BQ9H816 532 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 PAG1Q9NWQ8 432 aa9.33□□□□□ -0.92
TDP1-201ENST00000335725 DIAPH1O60610 1272 aaKnown RBP9.33□□□□□ -0.92
TDP1-201ENST00000335725 GLRX3O76003 335 aaKnown RBP9.33□□□□□ -0.92
TDP1-201ENST00000335725 UBOX5O94941 541 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms