RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 NR1D1P20393 614 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 ELF3P78545 371 aaPredicted RBP11.3□□□□□ -0.6
SF3B2-201ENST00000322535 CBX3Q13185 183 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 NAA16Q6N069 864 aaPredicted RBP11.3□□□□□ -0.6
SF3B2-201ENST00000322535 TBC1D16Q8TBP0 767 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 ZIM3Q96PE6 472 aa11.3□□□□□ -0.6
SF3B2-201ENST00000322535 DMGDHQ9UI17 866 aaKnown RBP11.3□□□□□ -0.6
SF3B2-201ENST00000322535 TTF2Q9UNY4 1162 aaKnown RBP11.3□□□□□ -0.6
SF3B2-201ENST00000322535 MXRA7P84157 204 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 SKOR1P84550 965 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 AMPD2Q01433 879 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 QPCTQ16769 361 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 ZNF394Q53GI3 561 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 CCDC70Q6NSX1 233 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 RASGRP2Q7LDG7 609 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 CTNNBL1Q8WYA6 563 aaPredicted RBP11.29□□□□□ -0.6
SF3B2-201ENST00000322535 HVCN1Q96D96 273 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 DSCC1Q9BVC3 393 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 BRIP1Q9BX63 1249 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 NAPBQ9H115 298 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 A0A1W2PQ27 194 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 A0A1W2PQ64 194 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 A0A1W2PQD8 194 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 DYTNA2CJ06 578 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 LIN7AO14910 233 aaPredicted RBP11.29□□□□□ -0.6
SF3B2-201ENST00000322535 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 SMARCA1P28370 1054 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 HDAC4P56524 1084 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 GTF2IP78347 998 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 IMMTQ16891 758 aaKnown RBP11.29□□□□□ -0.6
SF3B2-201ENST00000322535 RNF168Q8IYW5 571 aaPredicted RBP11.29□□□□□ -0.6
SF3B2-201ENST00000322535 IFNL3Q8IZI9 196 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 EHBP1Q8NDI1 1231 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 KCNG4Q8TDN1 519 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 WHAMMQ8TF30 809 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 JAKMIP2Q96AA8 810 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 ZNF512BQ96KM6 892 aaPredicted RBP11.29□□□□□ -0.6
SF3B2-201ENST00000322535 CCDC43Q96MW1 224 aaKnown RBP11.29□□□□□ -0.6
SF3B2-201ENST00000322535 LRRC1Q9BTT6 524 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 MYL10Q9BUA6 226 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 WDR37Q9Y2I8 494 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 LRP5O75197 1615 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 GSG1L2A8MUP6 293 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 PDE2AO00408 941 aaPredicted RBP11.29□□□□□ -0.6
SF3B2-201ENST00000322535 FAM107AO95990 144 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 STIP1P31948 543 aaKnown RBP11.29□□□□□ -0.6
SF3B2-201ENST00000322535 FXR1P51114 621 aaKnown RBP eCLIP11.29□□□□□ -0.61e-6■■■□□ 17.8
SF3B2-201ENST00000322535 GUCY2FP51841 1108 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 UBE3CQ15386 1083 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 FOXP4Q8IVH2 680 aaPredicted RBP11.29□□□□□ -0.6
SF3B2-201ENST00000322535 MAIP1Q8WWC4 291 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 SMARCAL1Q9NZC9 954 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 ATP8A1Q9Y2Q0 1164 aa11.29□□□□□ -0.6
SF3B2-201ENST00000322535 MMEP08473 750 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 BMP6P22004 513 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 CCT6AP40227 531 aaKnown RBP11.28□□□□□ -0.6
SF3B2-201ENST00000322535 PLOD1Q02809 727 aaPredicted RBP11.28□□□□□ -0.6
SF3B2-201ENST00000322535 IFFO1Q0D2I5 559 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 R3HDM1Q15032 1099 aaKnown RBP11.28□□□□□ -0.6
SF3B2-201ENST00000322535 CCDC92Q53HC0 331 aaPredicted RBP11.28□□□□□ -0.6
SF3B2-201ENST00000322535 MAATS1Q7Z4T9 603 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 DZIP1Q86YF9 867 aaKnown RBP11.28□□□□□ -0.6
SF3B2-201ENST00000322535 IFT81Q8WYA0 676 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 DTNBP1Q96EV8 351 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 PANX2Q96RD6 677 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 NUP88Q99567 741 aaPredicted RBP11.28□□□□□ -0.6
SF3B2-201ENST00000322535 CD209Q9NNX6 404 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 BARX2Q9UMQ3 279 aaPredicted RBP11.28□□□□□ -0.6
SF3B2-201ENST00000322535 MAGEB6P1A0A0J9YX57 407 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 CYP2D6P10635 497 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 ODF2Q5BJF6 829 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 CFAP58Q5T655 872 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 AENQ8WTP8 325 aaKnown RBP11.28□□□□□ -0.6
SF3B2-201ENST00000322535 NSUN4Q96CB9 384 aaKnown RBP11.28□□□□□ -0.6
SF3B2-201ENST00000322535 OXCT2Q9BYC2 517 aaPredicted RBP11.28□□□□□ -0.6
SF3B2-201ENST00000322535 COL24A1Q17RW2 1714 aa11.28□□□□□ -0.6
SF3B2-201ENST00000322535 GPR75-ASB3A0A0A6YYF3 556 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 RASSF10A6NK89 507 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 G3V3G9 751 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 N4BP3O15049 544 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 PDHA1P08559 390 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 SLURP2P0DP57 97 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 TMOD1P28289 359 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 MDH1P40925 334 aaKnown RBP11.27□□□□□ -0.6
SF3B2-201ENST00000322535 SCNN1DP51172 638 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 POSTNQ15063 836 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 KIAA0753Q2KHM9 967 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 DCAF8Q5TAQ9 597 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 C6orf89Q6UWU4 347 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 DPP8Q6V1X1 898 aaPredicted RBP11.27□□□□□ -0.6
SF3B2-201ENST00000322535 TRAPPC11Q7Z392 1133 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 GRAMD1CQ8IYS0 662 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 CCDC82Q8N4S0 544 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 AGAP11Q8TF27 550 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 ASB3Q9Y575 518 aa11.27□□□□□ -0.6
SF3B2-201ENST00000322535 H0YIN7 160 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 ALDH3A1P30838 453 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 FLT3P36888 993 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 ERVK-24P63145 666 aa11.27□□□□□ -0.61
SF3B2-201ENST00000322535 NSUN2Q08J23 767 aaKnown RBP eCLIP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms