RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 MRPL12P52815 198 aaKnown RBP16.72■□□□□ 0.27
CSDC2-201ENST00000306149 POLR2FP61218 127 aaKnown RBP16.72■□□□□ 0.27
CSDC2-201ENST00000306149 COL4A3BPQ9Y5P4 624 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 ZBTB5O15062 677 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 TLR2O60603 784 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 GGCXP38435 758 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 FKBP3Q00688 224 aaKnown RBP16.72■□□□□ 0.27
CSDC2-201ENST00000306149 TCP10Q12799 353 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 HERC4Q5GLZ8 1057 aaPredicted RBP16.72■□□□□ 0.27
CSDC2-201ENST00000306149 HGSNATQ68CP4 663 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 SPATA4Q8NEY3 305 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 RUBCNQ92622 972 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 MS4A14Q96JA4 679 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 TRIM34Q9BYJ4 488 aa16.72■□□□□ 0.27
CSDC2-201ENST00000306149 MYO1CO00159 1063 aa16.71■□□□□ 0.27
CSDC2-201ENST00000306149 NOL4O94818 638 aa16.71■□□□□ 0.27
CSDC2-201ENST00000306149 TAL1P17542 331 aaPredicted RBP16.71■□□□□ 0.27
CSDC2-201ENST00000306149 SKIDA1Q1XH10 827 aa16.71■□□□□ 0.27
CSDC2-201ENST00000306149 ZCWPW2Q504Y3 356 aa16.71■□□□□ 0.27
CSDC2-201ENST00000306149 CDC42EP5Q6NZY7 148 aa16.71■□□□□ 0.27
CSDC2-201ENST00000306149 ZNF572Q7Z3I7 529 aaPredicted RBP16.71■□□□□ 0.27
CSDC2-201ENST00000306149 LSM14BQ9BX40 385 aaKnown RBP16.71■□□□□ 0.27
CSDC2-201ENST00000306149 LCMT1Q9UIC8 334 aa16.71■□□□□ 0.27
CSDC2-201ENST00000306149 RRP15Q9Y3B9 282 aaKnown RBP16.71■□□□□ 0.27
CSDC2-201ENST00000306149 PSMD2Q13200 908 aa16.71■□□□□ 0.26
CSDC2-201ENST00000306149 GPBP1Q86WP2 473 aa16.71■□□□□ 0.26
CSDC2-201ENST00000306149 AFAP1L1Q8TED9 768 aa16.71■□□□□ 0.26
CSDC2-201ENST00000306149 KCNQ5Q9NR82 932 aa16.71■□□□□ 0.26
CSDC2-201ENST00000306149 LTBP4Q8N2S1 1624 aa16.71■□□□□ 0.26
CSDC2-201ENST00000306149 PLIN4Q96Q06 1357 aa16.71■□□□□ 0.26
CSDC2-201ENST00000306149 NHSQ6T4R5 1651 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 PLA2G4BP0C869 781 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 ITIH3Q06033 890 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 ASTE1Q2TB18 679 aaPredicted RBP16.7■□□□□ 0.26
CSDC2-201ENST00000306149 FAM83BQ5T0W9 1011 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 GOLGA6L1Q8N7Z2 621 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 ZC3H12CQ9C0D7 883 aaKnown RBP16.7■□□□□ 0.26
CSDC2-201ENST00000306149 BMP2KQ9NSY1 1161 aaPredicted RBP16.7■□□□□ 0.26
CSDC2-201ENST00000306149 ABCB11O95342 1321 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 MEIS1O00470 390 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 PPEF1O14829 653 aaPredicted RBP16.7■□□□□ 0.26
CSDC2-201ENST00000306149 LCA5LO95447 670 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 QRICH1Q2TAL8 776 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 CCDC181Q5TID7 509 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 ALS2CR12Q96Q35 445 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 TLR10Q9BXR5 811 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 RASSF4Q9H2L5 321 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 PCDHA1Q9Y5I3 950 aa16.7■□□□□ 0.26
CSDC2-201ENST00000306149 POTEFA5A3E0 1075 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 MED24O75448 989 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 POTEIP0CG38 1075 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 POTEGQ6S5H5 508 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 POTEEQ6S8J3 1075 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 SND1Q7KZF4 910 aaKnown RBP eCLIP16.69■□□□□ 0.26
CSDC2-201ENST00000306149 LRRC27Q9C0I9 530 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 AGPSO00116 658 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 KRT18P05783 430 aaKnown RBP16.69■□□□□ 0.26
CSDC2-201ENST00000306149 HOXA10P31260 410 aaPredicted RBP16.69■□□□□ 0.26
CSDC2-201ENST00000306149 RNASE9P60153 205 aaKnown RBP16.69■□□□□ 0.26
CSDC2-201ENST00000306149 DNAAF5Q86Y56 855 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 MMGT1Q8N4V1 131 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 SCFD1Q8WVM8 642 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 P2RX7Q99572 595 aaKnown RBP16.69■□□□□ 0.26
CSDC2-201ENST00000306149 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.69■□□□□ 0.26
CSDC2-201ENST00000306149 HYOU1Q9Y4L1 999 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.69■□□□□ 0.26
CSDC2-201ENST00000306149 FOCADQ5VW36 1801 aa16.69■□□□□ 0.26
CSDC2-201ENST00000306149 PRLRP16471 622 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 CASP5P51878 434 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 PSMC6P62333 389 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 RAPGEF1Q13905 1077 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 KLHDC7AQ5VTJ3 777 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 SFMBT2Q5VUG0 894 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 CCDC70Q6NSX1 233 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 LRRC31Q6UY01 552 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 TBC1D5Q92609 795 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 BCAS3Q9H6U6 928 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 DNAJC18Q9H819 358 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 PACSIN2Q9UNF0 486 aaPredicted RBP16.68■□□□□ 0.26
CSDC2-201ENST00000306149 PCDHA2Q9Y5H9 948 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 ATAD5Q96QE3 1844 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 POLRMTO00411 1230 aaKnown RBP16.68■□□□□ 0.26
CSDC2-201ENST00000306149 FTCDO95954 541 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 CYP11B2P19099 503 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 GPATCH4Q5T3I0 446 aaKnown RBP16.68■□□□□ 0.26
CSDC2-201ENST00000306149 APOBEC3HQ6NTF7 200 aaKnown RBP16.68■□□□□ 0.26
CSDC2-201ENST00000306149 AENQ8WTP8 325 aaKnown RBP16.68■□□□□ 0.26
CSDC2-201ENST00000306149 COA1Q9GZY4 146 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 EMILIN3Q9NT22 766 aa16.68■□□□□ 0.26
CSDC2-201ENST00000306149 RBM12Q9NTZ6 932 aaKnown RBP16.68■□□□□ 0.26
CSDC2-201ENST00000306149 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
CSDC2-201ENST00000306149 EEF2P13639 858 aaKnown RBP16.67■□□□□ 0.26
CSDC2-201ENST00000306149 ADRA2BP18089 450 aa16.67■□□□□ 0.26
CSDC2-201ENST00000306149 ADAM9Q13443 819 aa16.67■□□□□ 0.26
CSDC2-201ENST00000306149 SLC9C1Q4G0N8 1177 aa16.67■□□□□ 0.26
CSDC2-201ENST00000306149 ARSHQ5FYA8 562 aa16.67■□□□□ 0.26
CSDC2-201ENST00000306149 PPP1R18Q6NYC8 613 aa16.67■□□□□ 0.26
CSDC2-201ENST00000306149 CCDC65Q8IXS2 484 aa16.67■□□□□ 0.26
CSDC2-201ENST00000306149 PROM2Q8N271 834 aa16.67■□□□□ 0.26
CSDC2-201ENST00000306149 FAM133AQ8N9E0 248 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms