RNA–Protein interactions for RNA: ENST00000298694.8

ARHGEF40-201, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF40, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-201ENST00000298694 SH2B2O14492 632 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 ZMYND10O75800 440 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 SUN1O94901 812 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 HEXIM1O94992 359 aaKnown RBP17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 USP17L8P0C7I0 530 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 MSH2P43246 934 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 PLTPP55058 493 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 NR5A1Q13285 461 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 TMC4Q7Z404 712 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 PUS7LQ9H0K6 701 aaKnown RBP17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 CPSF3Q9UKF6 684 aaKnown RBP17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 TRPC5Q9UL62 973 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 SPDYE2BA6NHP3 402 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 RAD17O75943 681 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 SPDYE6P0CI01 402 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 CD58P19256 250 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 BASP1P80723 227 aaKnown RBP17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 PI16Q6UXB8 463 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 OR6B2Q6IFH4 312 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 TDRD7Q8NHU6 1098 aaKnown RBP17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 FIS1Q9Y3D6 152 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 ZNF500O60304 480 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 FTCDO95954 541 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 THOC5Q13769 683 aaKnown RBP17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 FAM81BQ96LP2 452 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 FNDC3AQ9Y2H6 1198 aaKnown RBP17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 ATP8A1Q9Y2Q0 1164 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 KCNQ4P56696 695 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 MIGA2Q7L4E1 593 aa17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 FTOQ9C0B1 505 aaKnown RBP eCLIP17.91■□□□□ 0.46
ARHGEF40-201ENST00000298694 PGRMC1O00264 195 aaKnown RBP17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 SEC31AO94979 1220 aaKnown RBP17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 STMN1P16949 149 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 CALN1Q9BXU9 219 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 GOLGA8QA0A0J9YX86 632 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 GOLGA8OA6NCC3 632 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 GOLGA8NF8WBI6 632 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 BBOX1O75936 387 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 CDC25AP30304 524 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 FKBP3Q00688 224 aaKnown RBP17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 KIAA1841Q6NSI8 718 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 ARMC9Q7Z3E5 817 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 CDHR1Q96JP9 859 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 UBN2Q6ZU65 1347 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 A0A087WWV3 80 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 ZNF233A6NK53 670 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 PSAPP07602 524 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 CXCR5P32302 372 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 LRRC4Q9HBW1 653 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 SPECC1L-ADORA2AF8WAN1 911 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 MYO1EQ12965 1108 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 SCARA5Q6ZMJ2 495 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 PLEKHF1Q96S99 279 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 MRPL47Q9HD33 250 aaKnown RBP17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 EMILIN3Q9NT22 766 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 RWDD2AQ9UIY3 292 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 MKRN3Q13064 507 aaKnown RBP17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 CCDC197Q8NCU1 140 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 RABGGTAQ92696 567 aa17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.9■□□□□ 0.46
ARHGEF40-201ENST00000298694 IKBKBO14920 756 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 SNAP25P60880 206 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 ZKSCAN8Q15776 578 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 CDC37Q16543 378 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 SIX6OS1Q8N1H7 587 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 ATP8B3O60423 1300 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 ADGRL2O95490 1459 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 CYP2D7A0A087X1C5 515 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 SLFN14P0C7P3 912 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 PLA2G4BP0C869 781 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 CCT5P48643 541 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 EPHB4P54760 987 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 ACRBPQ8NEB7 543 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 CFAP36Q96G28 342 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 DHX36Q9H2U1 1008 aaKnown RBP17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 ARHGEF6Q15052 776 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 TRIP13Q15645 432 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 TCP11X2Q5H9J9 407 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 TMTC3Q6ZXV5 915 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 PARVGQ9HBI0 331 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 JRKLQ9Y4A0 524 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.89■□□□□ 0.458e-7■■□□□ 14.5
ARHGEF40-201ENST00000298694 ZFYVE16Q7Z3T8 1539 aa17.89■□□□□ 0.45
ARHGEF40-201ENST00000298694 RNF123Q5XPI4 1314 aa17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 PPP1R2P3Q6NXS1 205 aa17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 HEXIM2Q96MH2 286 aaKnown RBP17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 USP17L3A6NCW0 530 aa17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 USP17L4A6NCW7 530 aa17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 ABCD1P33897 745 aa17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 USP17L1Q7RTZ2 530 aa17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 TRIM42Q8IWZ5 723 aa17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 GNGT2O14610 69 aa17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 PLCG1P19174 1290 aa17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 MX2P20592 715 aa17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 NHEJ1Q9H9Q4 299 aaPredicted RBP17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 SOWAHDA6NJG2 315 aa17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 NVLO15381 856 aaKnown RBP17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 PRPF3O43395 683 aaKnown RBP17.88■□□□□ 0.45
ARHGEF40-201ENST00000298694 PRPSAP2O60256 369 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms