RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ATF2P15336 505 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 PTPROQ16827 1216 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 G2E3Q7L622 706 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 NCF2P19878 526 aaPredicted RBP13.01□□□□□ -0.33
PCF11-201ENST00000298281 OAS2P29728 719 aaKnown RBP13.01□□□□□ -0.33
PCF11-201ENST00000298281 MXD4Q14582 209 aaPredicted RBP13.01□□□□□ -0.33
PCF11-201ENST00000298281 KCTD17Q8N5Z5 321 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 SUCLG2Q96I99 432 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 CCDC17Q96LX7 622 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 LRRIQ4A6NIV6 560 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 CHEK2O96017 543 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 SLC8A1P32418 973 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 ZNF233A6NK53 670 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 DPYSL4O14531 572 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 HSPD1P10809 573 aaKnown RBP13.01□□□□□ -0.33
PCF11-201ENST00000298281 NSFP46459 744 aaKnown RBP13.01□□□□□ -0.33
PCF11-201ENST00000298281 PSMC1P62191 440 aaKnown RBP13.01□□□□□ -0.33
PCF11-201ENST00000298281 ARMCX5Q6P1M9 558 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 C16orf87Q6PH81 154 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 VMP1Q96GC9 406 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 GDAP1L1Q96MZ0 367 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 LRRC37BQ96QE4 947 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 KIFC3Q9BVG8 833 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 XPO4Q9C0E2 1151 aaKnown RBP13.01□□□□□ -0.33
PCF11-201ENST00000298281 ZMYM6O95789 1325 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 CMA1P23946 247 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 INAQ16352 499 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 RFX6Q8HWS3 928 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 ASZ1Q8WWH4 475 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 NUDCD1Q96RS6 583 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 TRIM15Q9C019 465 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 SERTAD1Q9UHV2 236 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 ACTN1P12814 892 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 SCYL3Q8IZE3 742 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 PNMA1Q8ND90 353 aa13.01□□□□□ -0.33
PCF11-201ENST00000298281 CACTINQ8WUQ7 758 aaKnown RBP13.01□□□□□ -0.33
PCF11-201ENST00000298281 TSR3Q9UJK0 312 aaKnown RBP13.01□□□□□ -0.33
PCF11-201ENST00000298281 USP17L12C9JPN9 530 aa13□□□□□ -0.33
PCF11-201ENST00000298281 USP17L21D6R901 530 aa13□□□□□ -0.33
PCF11-201ENST00000298281 YWHAGP61981 247 aaKnown RBP eCLIP13□□□□□ -0.33
PCF11-201ENST00000298281 CERKLQ49MI3 558 aaPredicted RBP13□□□□□ -0.33
PCF11-201ENST00000298281 PPP6R3Q5H9R7 873 aaPredicted RBP13□□□□□ -0.33
PCF11-201ENST00000298281 GJC2Q5T442 439 aaPredicted RBP13□□□□□ -0.33
PCF11-201ENST00000298281 TTLL7Q6ZT98 887 aa13□□□□□ -0.33
PCF11-201ENST00000298281 TRIML2Q8N7C3 387 aa13□□□□□ -0.33
PCF11-201ENST00000298281 DDX25Q9UHL0 483 aaKnown RBP13□□□□□ -0.33
PCF11-201ENST00000298281 NUMA1Q14980 2115 aa13□□□□□ -0.33
PCF11-201ENST00000298281 GOLGA4Q13439 2230 aaKnown RBP13□□□□□ -0.33
PCF11-201ENST00000298281 HMGB3O15347 200 aaKnown RBP13□□□□□ -0.33
PCF11-201ENST00000298281 NDUFB5O43674 189 aa13□□□□□ -0.33
PCF11-201ENST00000298281 SCG2P13521 617 aa13□□□□□ -0.33
PCF11-201ENST00000298281 KCNA6P17658 529 aa13□□□□□ -0.33
PCF11-201ENST00000298281 KPNA2P52292 529 aaKnown RBP13□□□□□ -0.33
PCF11-201ENST00000298281 GPATCH4Q5T3I0 446 aaKnown RBP13□□□□□ -0.33
PCF11-201ENST00000298281 FANCBQ8NB91 859 aa13□□□□□ -0.33
PCF11-201ENST00000298281 SH3KBP1Q96B97 665 aa13□□□□□ -0.33
PCF11-201ENST00000298281 DMAP1Q9NPF5 467 aaPredicted RBP13□□□□□ -0.33
PCF11-201ENST00000298281 DCTN3O75935 186 aa13□□□□□ -0.33
PCF11-201ENST00000298281 CPP00450 1065 aa13□□□□□ -0.33
PCF11-201ENST00000298281 MCF2P10911 925 aa13□□□□□ -0.33
PCF11-201ENST00000298281 IL13P35225 146 aa13□□□□□ -0.33
PCF11-201ENST00000298281 CCNA1P78396 465 aa13□□□□□ -0.33
PCF11-201ENST00000298281 PGBD3Q8N328 593 aa13□□□□□ -0.33
PCF11-201ENST00000298281 MYL10Q9BUA6 226 aa13□□□□□ -0.33
PCF11-201ENST00000298281 LRRD1A4D1F6 860 aa13□□□□□ -0.33
PCF11-201ENST00000298281 LUC7L3O95232 432 aaKnown RBP13□□□□□ -0.33
PCF11-201ENST00000298281 A1BGP04217 495 aa13□□□□□ -0.33
PCF11-201ENST00000298281 SLC26A7Q8TE54 656 aa13□□□□□ -0.33
PCF11-201ENST00000298281 TLK1Q9UKI8 766 aa13□□□□□ -0.33
PCF11-201ENST00000298281 HADHAP40939 763 aa13□□□□□ -0.33
PCF11-201ENST00000298281 BAG6P46379 1132 aa13□□□□□ -0.33
PCF11-201ENST00000298281 BLZF1Q9H2G9 400 aa13□□□□□ -0.33
PCF11-201ENST00000298281 STK17AQ9UEE5 414 aa13□□□□□ -0.33
PCF11-201ENST00000298281 KDRP35968 1356 aa13□□□□□ -0.33
PCF11-201ENST00000298281 ATP8B3O60423 1300 aa13□□□□□ -0.33
PCF11-201ENST00000298281 KLRF2D3W0D1 207 aa13□□□□□ -0.33
PCF11-201ENST00000298281 FBXL5Q9UKA1 691 aa13□□□□□ -0.33
PCF11-201ENST00000298281 ZNF148Q9UQR1 794 aa13□□□□□ -0.33
PCF11-201ENST00000298281 GTF2IP78347 998 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 GRAMD4Q6IC98 578 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 SENP1Q9P0U3 644 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 TEX28O15482 410 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 RPSAP08865 295 aaKnown RBP12.99□□□□□ -0.33
PCF11-201ENST00000298281 SPATA1Q5VX52 437 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 SULF1Q8IWU6 871 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 ANKRD49Q8WVL7 239 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 OTUB1Q96FW1 271 aaPredicted RBP12.99□□□□□ -0.33
PCF11-201ENST00000298281 AK8Q96MA6 479 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 ATP6V0A4Q9HBG4 840 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 PCDHB4Q9Y5E5 795 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 MYO1FO00160 1098 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 ALAS1P13196 640 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 FAM26FQ5R3K3 315 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 DEPDC1BQ8WUY9 529 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 SCG3Q8WXD2 468 aaKnown RBP12.99□□□□□ -0.33
PCF11-201ENST00000298281 INTUQ9ULD6 942 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 HPCAL4Q9UM19 191 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 ZBTB12Q9Y330 459 aaPredicted RBP12.99□□□□□ -0.33
PCF11-201ENST00000298281 WDR17Q8IZU2 1322 aa12.99□□□□□ -0.33
PCF11-201ENST00000298281 GFAPP14136 432 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms