RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 TMEM179Q6ZVK1 233 aa18.77■□□□□ 0.6
SHANK1-201ENST00000293441 GOLGA8IPA6NC78 632 aa18.77■□□□□ 0.59
SHANK1-201ENST00000293441 GOLGA8JA6NMD2 632 aa18.77■□□□□ 0.59
SHANK1-201ENST00000293441 SASH1O94885 1247 aa18.77■□□□□ 0.59
SHANK1-201ENST00000293441 ACTN1P12814 892 aa18.77■□□□□ 0.59
SHANK1-201ENST00000293441 ANXA13P27216 316 aa18.77■□□□□ 0.59
SHANK1-201ENST00000293441 MCAMP43121 646 aa18.77■□□□□ 0.59
SHANK1-201ENST00000293441 RBBP5Q15291 538 aaKnown RBP18.77■□□□□ 0.59
SHANK1-201ENST00000293441 TRIM11Q96F44 468 aa18.77■□□□□ 0.59
SHANK1-201ENST00000293441 TDRD3Q9H7E2 651 aaKnown RBP18.77■□□□□ 0.59
SHANK1-201ENST00000293441 ATP8B3O60423 1300 aa18.77■□□□□ 0.59
SHANK1-201ENST00000293441 ARHGAP42A6NI28 874 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 FAM83BQ5T0W9 1011 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 TBC1D9BQ66K14 1250 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 BBOF1Q8ND07 529 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 FAM133AQ8N9E0 248 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 MAP3K4Q9Y6R4 1608 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 HEXIM2Q96MH2 286 aaKnown RBP18.76■□□□□ 0.59
SHANK1-201ENST00000293441 PLEKHA8P1O95397 391 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 MAN2A1Q16706 1144 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 MAGOHBQ96A72 148 aaKnown RBP18.76■□□□□ 0.59
SHANK1-201ENST00000293441 EMILIN3Q9NT22 766 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 ATP1A2P50993 1020 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 LLGL1Q15334 1064 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 OSBPL3Q9H4L5 887 aa18.76■□□□□ 0.59
SHANK1-201ENST00000293441 ABCA8O94911 1581 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 ABCD1P33897 745 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 OR6B2Q6IFH4 312 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 DSTYKQ6XUX3 929 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 LMNTD2Q8IXW0 634 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 RAB3IPQ96QF0 476 aaPredicted RBP18.75■□□□□ 0.59
SHANK1-201ENST00000293441 PCDHB6Q9Y5E3 794 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 KRT1P04264 644 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 ASNSP08243 561 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 CYP2D6P10635 497 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 CLEC4GQ6UXB4 293 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 MICAL1Q8TDZ2 1067 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 HOMER3Q9NSC5 361 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 FNDC3AQ9Y2H6 1198 aaKnown RBP18.75■□□□□ 0.59
SHANK1-201ENST00000293441 NKX1-1Q15270 411 aaPredicted RBP18.75■□□□□ 0.59
SHANK1-201ENST00000293441 POTEDQ86YR6 584 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 ZNF233A6NK53 670 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 ENC1O14682 589 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 KCTD6Q8NC69 237 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 IFT122Q9HBG6 1241 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 SPATA31A3Q5VYP0 1347 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 A0A087WWV3 80 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 GUCY2DQ02846 1103 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 DNAJC24Q6P3W2 148 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 SIX6OS1Q8N1H7 587 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 UBN1Q9NPG3 1134 aa18.75■□□□□ 0.59
SHANK1-201ENST00000293441 EEF1GP26641 437 aaKnown RBP18.74■□□□□ 0.59
SHANK1-201ENST00000293441 WRNIP1Q96S55 665 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 MSTO1Q9BUK6 570 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 RAVER2Q9HCJ3 691 aaKnown RBP18.74■□□□□ 0.59
SHANK1-201ENST00000293441 ANGPTL3Q9Y5C1 460 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 ZHX2Q9Y6X8 837 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 CHD1O14646 1710 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 SFI1A8K8P3 1242 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 INHBAP08476 426 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 DPCR1Q3MIW9 517 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 CHMP6Q96FZ7 201 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 AIFM3Q96NN9 605 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 CDK12Q9NYV4 1490 aaPredicted RBP18.74■□□□□ 0.59
SHANK1-201ENST00000293441 ADGRL3Q9HAR2 1447 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 FKBP3Q00688 224 aaKnown RBP18.74■□□□□ 0.59
SHANK1-201ENST00000293441 BRD3Q15059 726 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 MCUQ8NE86 351 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 ELF1P32519 619 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 NFX1Q12986 1120 aaKnown RBP18.74■□□□□ 0.59
SHANK1-201ENST00000293441 RRAGDQ9NQL2 400 aaPredicted RBP18.74■□□□□ 0.59
SHANK1-201ENST00000293441 ARL4AP40617 200 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 PDE1BQ01064 536 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 MBD5Q9P267 1494 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 COL15A1P39059 1388 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 PPFIA4O75335 1185 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 PEX3P56589 373 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 LMNB2Q03252 620 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 GCNAQ96QF7 691 aa18.74■□□□□ 0.59
SHANK1-201ENST00000293441 DNAAF3Q8N9W5 541 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 ZBED2Q9BTP6 218 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 KLHL14Q9P2G3 628 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 KDM6BO15054 1643 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 GOLGA8KD6RF30 607 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 GNGT1P63211 74 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 RC3H1Q5TC82 1133 aaKnown RBP18.73■□□□□ 0.59
SHANK1-201ENST00000293441 RNF139Q8WU17 664 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 DCAF4Q8WV16 495 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 RUNDC3BQ96NL0 473 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 CALN1Q9BXU9 219 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 FAM196BA6NMK8 535 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 USP17L5A8MUK1 530 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 K7ERI5 159 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 MCF2LO15068 1137 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 FAM81BQ96LP2 452 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 IFNAR1P17181 557 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 ARHGAP25P42331 645 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 TSNAXIP1Q2TAA8 658 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 JADE1Q6IE81 842 aa18.73■□□□□ 0.59
SHANK1-201ENST00000293441 MINPP1Q9UNW1 487 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms