RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 NCAPD2Q15021 1401 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 FAM237AA0A1B0GTK4 181 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 TMED8Q6PL24 325 aaPredicted RBP17.74■□□□□ 0.43
GPC1-201ENST00000264039 IRF2BP1Q8IU81 584 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 ENAHQ8N8S7 591 aaPredicted RBP17.74■□□□□ 0.43
GPC1-201ENST00000264039 GBP5Q96PP8 586 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 NUCKS1Q9H1E3 243 aaKnown RBP17.74■□□□□ 0.43
GPC1-201ENST00000264039 AMFRQ9UKV5 643 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 PLAGL2Q9UPG8 496 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 PDS5AQ29RF7 1337 aaKnown RBP17.74■□□□□ 0.43
GPC1-201ENST00000264039 ANKARQ7Z5J8 1434 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 TXNRD1Q16881 649 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 PIK3R5Q8WYR1 880 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 FAXDC2Q96IV6 333 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 VCXQ9H320 206 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 BATF3Q9NR55 127 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 RNF14Q9UBS8 474 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 CNOT8Q9UFF9 292 aaKnown RBP17.74■□□□□ 0.43
GPC1-201ENST00000264039 GSG1L2A8MUP6 293 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 RASGRF2O14827 1237 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 EPB41P11171 864 aaKnown RBP17.74■□□□□ 0.43
GPC1-201ENST00000264039 RWDD2BP57060 319 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 CUL1Q13616 776 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 GLG1Q92896 1179 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 RAB17Q9H0T7 212 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 TMEM60Q9H2L4 133 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 TRIM33Q9UPN9 1127 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 UTYO14607 1347 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 STK36Q9NRP7 1315 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 RIMBP3CA6NJZ7 1639 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 RIMBP3BA6NNM3 1639 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 RFX7Q2KHR2 1363 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 RIMBP3Q9UFD9 1639 aa17.74■□□□□ 0.43
GPC1-201ENST00000264039 CALM1P0DP23 149 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 CALM2P0DP24 149 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 CALM3P0DP25 149 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 RASGRF1Q13972 1273 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 ERICH1Q86X53 443 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 STMN4Q9H169 189 aaPredicted RBP17.73■□□□□ 0.43
GPC1-201ENST00000264039 DLGAP2Q9P1A6 1054 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 KIF3CO14782 793 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 SNUPNO95149 360 aaKnown RBP17.73■□□□□ 0.43
GPC1-201ENST00000264039 H2AFZP0C0S5 128 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 VEGFAP15692 232 aaPredicted RBP17.73■□□□□ 0.43
GPC1-201ENST00000264039 GNAT2P19087 354 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 FLT3P36888 993 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 TRIP13Q15645 432 aaPredicted RBP17.73■□□□□ 0.43
GPC1-201ENST00000264039 ARHGAP44Q17R89 818 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 EAPPQ56P03 285 aaPredicted RBP17.73■□□□□ 0.43
GPC1-201ENST00000264039 ALKBH5Q6P6C2 394 aaKnown RBP17.73■□□□□ 0.43
GPC1-201ENST00000264039 H2AFVQ71UI9 128 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 DCAF5Q96JK2 942 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 RAB34Q9BZG1 259 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 CNOT10Q9H9A5 744 aaKnown RBP17.73■□□□□ 0.43
GPC1-201ENST00000264039 PCDHB13Q9Y5F0 798 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 A0A087X0T9 212 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 CCDC189A1A4V9 331 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 LRRC10BA6NIK2 292 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 FAM228BP0C875 321 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 PHKG2P15735 406 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 ALDH5A1P51649 535 aaPredicted RBP17.73■□□□□ 0.43
GPC1-201ENST00000264039 TBC1D22AQ8WUA7 517 aa17.73■□□□□ 0.43
GPC1-201ENST00000264039 DDX17Q92841 729 aaKnown RBP17.73■□□□□ 0.43
GPC1-201ENST00000264039 FOXP2O15409 715 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 PDE8BO95263 885 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 ZC3H18Q86VM9 953 aaKnown RBP17.72■□□□□ 0.43
GPC1-201ENST00000264039 USP38Q8NB14 1042 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 KIF20BQ96Q89 1820 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 FLOT1O75955 427 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 SHBGP04278 402 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 PDE6CP51160 858 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 LRRC23Q53EV4 343 aaPredicted RBP17.72■□□□□ 0.43
GPC1-201ENST00000264039 YTHDF3Q7Z739 585 aaKnown RBP17.72■□□□□ 0.43
GPC1-201ENST00000264039 PPFIBP2Q8ND30 876 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 TTLL11Q8NHH1 800 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 MTRQ99707 1265 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 A1CFQ9NQ94 594 aaKnown RBP17.72■□□□□ 0.43
GPC1-201ENST00000264039 PAPOLBQ9NRJ5 636 aaKnown RBP17.72■□□□□ 0.43
GPC1-201ENST00000264039 USP31Q70CQ4 1352 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 ZC3H4Q9UPT8 1303 aaKnown RBP17.72■□□□□ 0.43
GPC1-201ENST00000264039 C21orf2O43822 256 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 STMN2Q93045 179 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 PLCB1Q9NQ66 1216 aa17.72■□□□□ 0.43
GPC1-201ENST00000264039 NBPF26B4DH59 902 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 TSPY3P0CV98 308 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 TSPY8P0CW00 308 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 PLS1Q14651 629 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 PUM3Q15397 648 aaKnown RBP17.71■□□□□ 0.43
GPC1-201ENST00000264039 NBPF10Q6P3W6 841 aaKnown RBP17.71■□□□□ 0.43
GPC1-201ENST00000264039 KRT28Q7Z3Y7 464 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 NBPF15Q8N660 670 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 CCHCR1Q8TD31 782 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 TEKT4Q8WW24 435 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 NUDCD1Q96RS6 583 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 CTTNBP2NLQ9P2B4 639 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 CEMIPQ8WUJ3 1361 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 PRPF3O43395 683 aaKnown RBP17.71■□□□□ 0.43
GPC1-201ENST00000264039 SERPING1P05155 500 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 SLC8A3P57103 927 aa17.71■□□□□ 0.43
GPC1-201ENST00000264039 IFI35P80217 286 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms